RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 FTSJ3Q8IY81 847 aaKnown RBP21.7■■□□□ 1.06
CLN6-218ENST00000637223 TTLL6Q8N841 843 aa21.7■■□□□ 1.06
CLN6-218ENST00000637223 KLRG1Q96E93 195 aa21.7■■□□□ 1.06
CLN6-218ENST00000637223 NBPF7P0C2Y1 421 aaPredicted RBP21.69■■□□□ 1.06
CLN6-218ENST00000637223 INTS3Q68E01 1043 aaKnown RBP21.69■■□□□ 1.06
CLN6-218ENST00000637223 ARHGAP27Q6ZUM4 889 aa21.69■■□□□ 1.06
CLN6-218ENST00000637223 DZIP1LQ8IYY4 767 aaKnown RBP21.69■■□□□ 1.06
CLN6-218ENST00000637223 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
CLN6-218ENST00000637223 CNKSR1Q969H4 720 aa21.69■■□□□ 1.06
CLN6-218ENST00000637223 RBM17Q96I25 401 aaKnown RBP21.69■■□□□ 1.06
CLN6-218ENST00000637223 CCDC85AQ96PX6 553 aaPredicted RBP21.69■■□□□ 1.06
CLN6-218ENST00000637223 RLBP1P12271 317 aa21.68■■□□□ 1.06
CLN6-218ENST00000637223 CTSWP56202 376 aa21.68■■□□□ 1.06
CLN6-218ENST00000637223 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
CLN6-218ENST00000637223 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
CLN6-218ENST00000637223 DDX60Q8IY21 1712 aaKnown RBP21.68■■□□□ 1.06
CLN6-218ENST00000637223 UTYO14607 1347 aa21.67■■□□□ 1.06
CLN6-218ENST00000637223 HOXA10P31260 410 aaPredicted RBP21.67■■□□□ 1.06
CLN6-218ENST00000637223 PRPF40BQ6NWY9 871 aaKnown RBP21.67■■□□□ 1.06
CLN6-218ENST00000637223 DDX46Q7L014 1031 aaKnown RBP21.67■■□□□ 1.06
CLN6-218ENST00000637223 TNS4Q8IZW8 715 aa21.67■■□□□ 1.06
CLN6-218ENST00000637223 JMYQ8N9B5 988 aa21.67■■□□□ 1.06
CLN6-218ENST00000637223 RBM46Q8TBY0 533 aaKnown RBP21.67■■□□□ 1.06
CLN6-218ENST00000637223 PANK1Q8TE04 598 aa21.67■■□□□ 1.06
CLN6-218ENST00000637223 ZNF219Q9P2Y4 722 aaPredicted RBP21.67■■□□□ 1.06
CLN6-218ENST00000637223 WDR90Q96KV7 1748 aa21.66■■□□□ 1.06
CLN6-218ENST00000637223 ALDH1B1P30837 517 aa21.66■■□□□ 1.06
CLN6-218ENST00000637223 CCDC152Q4G0S7 254 aa21.66■■□□□ 1.06
CLN6-218ENST00000637223 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
CLN6-218ENST00000637223 SUCLG2Q96I99 432 aa21.66■■□□□ 1.06
CLN6-218ENST00000637223 PLA2G12BQ9BX93 195 aa21.66■■□□□ 1.06
CLN6-218ENST00000637223 EPHA10Q5JZY3 1008 aa21.65■■□□□ 1.06
CLN6-218ENST00000637223 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
CLN6-218ENST00000637223 TTLL11Q8NHH1 800 aa21.65■■□□□ 1.06
CLN6-218ENST00000637223 CRAMP1Q96RY5 1269 aa21.65■■□□□ 1.06
CLN6-218ENST00000637223 MEIS3Q99687 375 aa21.65■■□□□ 1.06
CLN6-218ENST00000637223 DLEC1Q9Y238 1755 aa21.65■■□□□ 1.06
CLN6-218ENST00000637223 LAMB2P55268 1798 aa21.64■■□□□ 1.06
CLN6-218ENST00000637223 FOXO4P98177 505 aa21.64■■□□□ 1.05
CLN6-218ENST00000637223 ITPRIPQ8IWB1 547 aa21.64■■□□□ 1.05
CLN6-218ENST00000637223 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.05
CLN6-218ENST00000637223 C21orf2O43822 256 aa21.63■■□□□ 1.05
CLN6-218ENST00000637223 PRELPP51888 382 aa21.63■■□□□ 1.05
CLN6-218ENST00000637223 KAZALD1Q96I82 304 aa21.63■■□□□ 1.05
CLN6-218ENST00000637223 GREM2Q9H772 168 aa21.63■■□□□ 1.05
CLN6-218ENST00000637223 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
CLN6-218ENST00000637223 UBTFL1P0CB47 393 aaPredicted RBP21.62■■□□□ 1.05
CLN6-218ENST00000637223 MS4A1P11836 297 aa21.62■■□□□ 1.05
CLN6-218ENST00000637223 GRAPQ13588 217 aa21.62■■□□□ 1.05
CLN6-218ENST00000637223 SLC51AQ86UW1 340 aa21.62■■□□□ 1.05
CLN6-218ENST00000637223 GRAPLQ8TC17 118 aaPredicted RBP21.62■■□□□ 1.05
CLN6-218ENST00000637223 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
CLN6-218ENST00000637223 CHMP3Q9Y3E7 222 aa21.62■■□□□ 1.05
CLN6-218ENST00000637223 BRCA1P38398 1863 aaKnown RBP21.61■■□□□ 1.05
CLN6-218ENST00000637223 PPEF1O14829 653 aaPredicted RBP21.61■■□□□ 1.05
CLN6-218ENST00000637223 CSF1RP07333 972 aa21.61■■□□□ 1.05
CLN6-218ENST00000637223 RRP1P56182 461 aaKnown RBP21.61■■□□□ 1.05
CLN6-218ENST00000637223 FAM161AQ3B820 660 aa21.61■■□□□ 1.05
CLN6-218ENST00000637223 C20orf194Q5TEA3 1177 aa21.61■■□□□ 1.05
CLN6-218ENST00000637223 C9orf131Q5VYM1 1079 aa21.61■■□□□ 1.05
CLN6-218ENST00000637223 LMBR1LQ6UX01 489 aa21.61■■□□□ 1.05
CLN6-218ENST00000637223 OLFM4Q6UX06 510 aa21.61■■□□□ 1.05
CLN6-218ENST00000637223 BICC1Q9H694 974 aaKnown RBP21.61■■□□□ 1.05
CLN6-218ENST00000637223 FSTL1Q12841 308 aa21.6■■□□□ 1.05
CLN6-218ENST00000637223 GNAI3P08754 354 aa21.59■■□□□ 1.05
CLN6-218ENST00000637223 C7orf43Q8WVR3 580 aa21.59■■□□□ 1.05
CLN6-218ENST00000637223 COG6Q9Y2V7 657 aa21.59■■□□□ 1.05
CLN6-218ENST00000637223 LRRFIP2Q9Y608 721 aaKnown RBP21.59■■□□□ 1.05
CLN6-218ENST00000637223 BBOX1O75936 387 aa21.58■■□□□ 1.05
CLN6-218ENST00000637223 ITGA6P23229 1130 aa21.58■■□□□ 1.05
CLN6-218ENST00000637223 ANKRD44Q8N8A2 993 aa21.58■■□□□ 1.05
CLN6-218ENST00000637223 COL4A1P02462 1669 aa21.58■■□□□ 1.05
CLN6-218ENST00000637223 RTL9Q8NET4 1388 aa21.58■■□□□ 1.04
CLN6-218ENST00000637223 SLX4Q8IY92 1834 aa21.57■■□□□ 1.04
CLN6-218ENST00000637223 RPS8P62241 208 aaKnown RBP21.57■■□□□ 1.04
CLN6-218ENST00000637223 CDC5LQ99459 802 aaKnown RBP21.57■■□□□ 1.04
CLN6-218ENST00000637223 PDE3AQ14432 1141 aa21.56■■□□□ 1.04
CLN6-218ENST00000637223 MVPQ14764 893 aaKnown RBP21.56■■□□□ 1.04
CLN6-218ENST00000637223 RABL6Q3YEC7 729 aaPredicted RBP21.56■■□□□ 1.04
CLN6-218ENST00000637223 ANKRD18AQ8IVF6 992 aa21.56■■□□□ 1.04
CLN6-218ENST00000637223 RRAGCQ9HB90 399 aa21.56■■□□□ 1.04
CLN6-218ENST00000637223 ATP6V0A2Q9Y487 856 aa21.56■■□□□ 1.04
CLN6-218ENST00000637223 ANKRD18BA2A2Z9 1011 aa21.55■■□□□ 1.04
CLN6-218ENST00000637223 ZBTB7BO15156 539 aaPredicted RBP21.55■■□□□ 1.04
CLN6-218ENST00000637223 IFIT5Q13325 482 aaKnown RBP21.55■■□□□ 1.04
CLN6-218ENST00000637223 CCDC93Q567U6 631 aa21.55■■□□□ 1.04
CLN6-218ENST00000637223 SOGA3Q5TF21 947 aa21.55■■□□□ 1.04
CLN6-218ENST00000637223 HDAC5Q9UQL6 1122 aa21.55■■□□□ 1.04
CLN6-218ENST00000637223 KDM2BQ8NHM5 1336 aa21.55■■□□□ 1.04
CLN6-218ENST00000637223 GNAI2P04899 355 aa21.54■■□□□ 1.04
CLN6-218ENST00000637223 RASSF7Q02833 373 aa21.54■■□□□ 1.04
CLN6-218ENST00000637223 CCDC57Q2TAC2 916 aa21.54■■□□□ 1.04
CLN6-218ENST00000637223 CACNA1SQ13698 1873 aa21.54■■□□□ 1.04
CLN6-218ENST00000637223 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
CLN6-218ENST00000637223 TMC4Q7Z404 712 aa21.53■■□□□ 1.04
CLN6-218ENST00000637223 SP8Q8IXZ3 490 aa21.53■■□□□ 1.04
CLN6-218ENST00000637223 ZNF594Q96JF6 807 aaPredicted RBP21.53■■□□□ 1.04
CLN6-218ENST00000637223 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
CLN6-218ENST00000637223 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
CLN6-218ENST00000637223 NFKBIEO00221 500 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms