RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MMP10P09238 476 aa16.6■□□□□ 0.25
LINC00643-207ENST00000637212 ST5P78524 1137 aa16.6■□□□□ 0.25
LINC00643-207ENST00000637212 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
LINC00643-207ENST00000637212 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
LINC00643-207ENST00000637212 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
LINC00643-207ENST00000637212 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
LINC00643-207ENST00000637212 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
LINC00643-207ENST00000637212 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
LINC00643-207ENST00000637212 ANKRD45Q5TZF3 282 aa16.59■□□□□ 0.25
LINC00643-207ENST00000637212 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
LINC00643-207ENST00000637212 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
LINC00643-207ENST00000637212 CIAO1O76071 339 aa16.58■□□□□ 0.24
LINC00643-207ENST00000637212 ITGA6P23229 1130 aa16.58■□□□□ 0.24
LINC00643-207ENST00000637212 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
LINC00643-207ENST00000637212 BRIP1Q9BX63 1249 aa16.58■□□□□ 0.24
LINC00643-207ENST00000637212 GREM2Q9H772 168 aa16.58■□□□□ 0.24
LINC00643-207ENST00000637212 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
LINC00643-207ENST00000637212 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
LINC00643-207ENST00000637212 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
LINC00643-207ENST00000637212 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
LINC00643-207ENST00000637212 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
LINC00643-207ENST00000637212 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
LINC00643-207ENST00000637212 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
LINC00643-207ENST00000637212 EYA2O00167 538 aa16.56■□□□□ 0.24
LINC00643-207ENST00000637212 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
LINC00643-207ENST00000637212 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
LINC00643-207ENST00000637212 MSL1Q68DK7 614 aa16.56■□□□□ 0.24
LINC00643-207ENST00000637212 PA2G4Q9UQ80 394 aaKnown RBP16.56■□□□□ 0.24
LINC00643-207ENST00000637212 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
LINC00643-207ENST00000637212 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
LINC00643-207ENST00000637212 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
LINC00643-207ENST00000637212 OS9Q13438 667 aaPredicted RBP16.55■□□□□ 0.24
LINC00643-207ENST00000637212 R3HDM1Q15032 1099 aaKnown RBP16.55■□□□□ 0.24
LINC00643-207ENST00000637212 CRY2Q49AN0 593 aa16.55■□□□□ 0.24
LINC00643-207ENST00000637212 RHPN1Q8TCX5 695 aa16.55■□□□□ 0.24
LINC00643-207ENST00000637212 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
LINC00643-207ENST00000637212 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
LINC00643-207ENST00000637212 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
LINC00643-207ENST00000637212 PDE6BP35913 854 aa16.54■□□□□ 0.24
LINC00643-207ENST00000637212 C3orf67Q6ZVT6 689 aa16.54■□□□□ 0.24
LINC00643-207ENST00000637212 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
LINC00643-207ENST00000637212 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
LINC00643-207ENST00000637212 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
LINC00643-207ENST00000637212 AFDNP55196 1824 aaKnown RBP16.54■□□□□ 0.24
LINC00643-207ENST00000637212 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
LINC00643-207ENST00000637212 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
LINC00643-207ENST00000637212 LDHAL6AQ6ZMR3 332 aa16.53■□□□□ 0.24
LINC00643-207ENST00000637212 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
LINC00643-207ENST00000637212 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
LINC00643-207ENST00000637212 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
LINC00643-207ENST00000637212 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
LINC00643-207ENST00000637212 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
LINC00643-207ENST00000637212 SASH1O94885 1247 aa16.52■□□□□ 0.24
LINC00643-207ENST00000637212 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
LINC00643-207ENST00000637212 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.24
LINC00643-207ENST00000637212 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.24
LINC00643-207ENST00000637212 SIL1Q9H173 461 aa16.52■□□□□ 0.24
LINC00643-207ENST00000637212 GPR108Q9NPR9 543 aa16.52■□□□□ 0.24
LINC00643-207ENST00000637212 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
LINC00643-207ENST00000637212 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
LINC00643-207ENST00000637212 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
LINC00643-207ENST00000637212 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
LINC00643-207ENST00000637212 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
LINC00643-207ENST00000637212 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
LINC00643-207ENST00000637212 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
LINC00643-207ENST00000637212 CNNM1Q9NRU3 951 aa16.51■□□□□ 0.23
LINC00643-207ENST00000637212 BSDC1Q9NW68 430 aaPredicted RBP16.51■□□□□ 0.23
LINC00643-207ENST00000637212 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
LINC00643-207ENST00000637212 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
LINC00643-207ENST00000637212 APBB1O00213 710 aa16.5■□□□□ 0.23
LINC00643-207ENST00000637212 BBOX1O75936 387 aa16.5■□□□□ 0.23
LINC00643-207ENST00000637212 POLD1P28340 1107 aa16.5■□□□□ 0.23
LINC00643-207ENST00000637212 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
LINC00643-207ENST00000637212 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
LINC00643-207ENST00000637212 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
LINC00643-207ENST00000637212 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
LINC00643-207ENST00000637212 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
LINC00643-207ENST00000637212 NPR1P16066 1061 aa16.49■□□□□ 0.23
LINC00643-207ENST00000637212 TFCP2Q12800 502 aa16.49■□□□□ 0.23
LINC00643-207ENST00000637212 GRAPQ13588 217 aa16.49■□□□□ 0.23
LINC00643-207ENST00000637212 GRAPLQ8TC17 118 aaPredicted RBP16.49■□□□□ 0.23
LINC00643-207ENST00000637212 AKAP2Q9Y2D5 859 aa16.49■□□□□ 0.23
LINC00643-207ENST00000637212 TUBGCP6Q96RT7 1819 aa16.48■□□□□ 0.23
LINC00643-207ENST00000637212 SRGNP10124 158 aa16.48■□□□□ 0.23
LINC00643-207ENST00000637212 PDE4AP27815 886 aa16.48■□□□□ 0.23
LINC00643-207ENST00000637212 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
LINC00643-207ENST00000637212 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
LINC00643-207ENST00000637212 H0YIN7 160 aa16.47■□□□□ 0.23
LINC00643-207ENST00000637212 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
LINC00643-207ENST00000637212 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
LINC00643-207ENST00000637212 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
LINC00643-207ENST00000637212 MASTLQ96GX5 879 aa16.47■□□□□ 0.23
LINC00643-207ENST00000637212 IL1RAPL2Q9NP60 686 aa16.47■□□□□ 0.23
LINC00643-207ENST00000637212 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
LINC00643-207ENST00000637212 PDE8BO95263 885 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
LINC00643-207ENST00000637212 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 PLEKHM2Q8IWE5 1019 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 ANKRD2Q9GZV1 360 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms