RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 GRIK4Q16099 956 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 SWI5Q1ZZU3 235 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 FAM35AQ86V20 835 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 TXNRD3Q86VQ6 643 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 NUDT8Q8WV74 236 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 VTI1AQ96AJ9 217 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 IGFLR1Q9H665 355 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 KLK14Q9P0G3 267 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 HOXD8P13378 290 aaPredicted RBP3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 NRLP54845 237 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 GRIK5Q16478 980 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 ZMYM1Q5SVZ6 1142 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 MSL1Q68DK7 614 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 DHX32Q7L7V1 743 aaKnown RBP3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 FMR1NBQ8N0W7 255 aaPredicted RBP3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 COL26A1Q96A83 441 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 IFT43Q96FT9 208 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 ZFATQ9P243 1243 aa3.33□□□□□ -1.88
SYNGAP1-220ENST00000637194 ZBTB42B2RXF5 422 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 OPLAHO14841 1288 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 LGR5O75473 907 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 SASH3O75995 380 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 RARAP10276 462 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 CPB1P15086 417 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 RFX1P22670 979 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 ELMSAN1Q6PJG2 1045 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 FBXO11Q86XK2 927 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 DMRTC2Q8IXT2 367 aaPredicted RBP3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 LPIN3Q9BQK8 851 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 SSBP4Q9BWG4 385 aaPredicted RBP3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 TLR7Q9NYK1 1049 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 LRFN2Q9ULH4 789 aa3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 NOVA2Q9UNW9 492 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 RTCBQ9Y3I0 505 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 ACIN1Q9UKV3 1341 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-220ENST00000637194 XYLBO75191 536 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 TARSP26639 723 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 SOX18P35713 384 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 PLAURQ03405 335 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 FKBP5Q13451 457 aaPredicted RBP3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 OCLNQ16625 522 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 COX20Q5RI15 118 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 PERM1Q5SV97 790 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 KRT25Q7Z3Z0 450 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 TREML1Q86YW5 311 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 WFDC8Q8IUA0 241 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 DCAF11Q8TEB1 546 aa3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 SRA1Q9HD15 236 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 ZNF777Q9ULD5 760 aaPredicted RBP3.31□□□□□ -1.88
SYNGAP1-220ENST00000637194 ATG7O95352 703 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 PSAPP07602 524 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 BRD2P25440 801 aaKnown RBP3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 SRPK2P78362 688 aaKnown RBP3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 FAM69CQ0P6D2 419 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 FOXD4L6Q3SYB3 417 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 PRSS36Q5K4E3 855 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 ARTNQ5T4W7 220 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 IGF2-ASQ6U949 168 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 SHISA2Q6UWI4 295 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 FOXD4L3Q6VB84 417 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 MAP4K3Q8IVH8 894 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 CACTIN-AS1Q8N1I8 211 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 SMG9Q9H0W8 520 aaKnown RBP3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 FAM13BQ9NYF5 915 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 USP21Q9UK80 565 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 ZMIZ1Q9ULJ6 1067 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 KCNMB2Q9Y691 235 aa3.3□□□□□ -1.88
SYNGAP1-220ENST00000637194 LOC102724428A0A0B4J2F2 783 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 DLL1O00548 723 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 MMP20O60882 483 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 PTCD1O75127 700 aaKnown RBP3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 EIF2AK2P19525 551 aaKnown RBP3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 SIK1P57059 783 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 MLLT1Q03111 559 aaPredicted RBP3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 CDCA8Q53HL2 280 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 C16orf46Q6P387 395 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 NLRP13Q86W25 1043 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 ETFBKMTQ8IXQ9 262 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 RGL4Q8IZJ4 473 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 CMTR1Q8N1G2 835 aaKnown RBP3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 TMEM130Q8N3G9 435 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 WFDC12Q8WWY7 111 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 TP53INP1Q96A56 240 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 PLD4Q96BZ4 506 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 PRIMPOLQ96LW4 560 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 RBSNQ9H1K0 784 aa3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 CXXC1Q9P0U4 656 aaPredicted RBP3.29□□□□□ -1.88
SYNGAP1-220ENST00000637194 SCO2A0A1W2PP80 73 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 TNFRSF10BO14763 440 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 PRMT3O60678 531 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 DEAF1O75398 565 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 GHRHP01286 108 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 NOS3P29474 1203 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 SLC51AQ86UW1 340 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 PIK3R5Q8WYR1 880 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 CLP1Q92989 425 aaKnown RBP3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 MRPL18Q9H0U6 180 aaKnown RBP3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 MUC3BQ9H195 1237 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 ZFP64Q9NPA5 681 aa3.28□□□□□ -1.88
SYNGAP1-220ENST00000637194 USP20Q9Y2K6 914 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms