RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
CACNA1A-236ENST00000637117 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-236ENST00000637117 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-236ENST00000637117 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
CACNA1A-236ENST00000637117 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-236ENST00000637117 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-236ENST00000637117 COL11A2P13942 1736 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 C7P10643 843 aa12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 NPR1P16066 1061 aa12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
CACNA1A-236ENST00000637117 EPHX2P34913 555 aa12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 LBX1P52954 281 aa12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 DEFB115Q30KQ5 88 aa12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
CACNA1A-236ENST00000637117 SCN4AP35499 1836 aa12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 SCN7AQ01118 1682 aa12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 ZNF652Q9Y2D9 606 aa12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
CACNA1A-236ENST00000637117 CACNA1SQ13698 1873 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 PRAMEF22A3QJZ6 481 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 FZD9O00144 591 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 HIC1Q14526 733 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
CACNA1A-236ENST00000637117 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 SNRPA1P09661 255 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 IARSP41252 1262 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-236ENST00000637117 GTF2E1P29083 439 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 MAP2K1Q02750 393 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 GPC2Q8N158 579 aa12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 ABT1Q9ULW3 272 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 WDR33Q9C0J8 1336 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 ARFGEF2Q9Y6D5 1785 aa12.27□□□□□ -0.45
CACNA1A-236ENST00000637117 SIPA1L3O60292 1781 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 IRF6O14896 467 aa12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 HSPA8P11142 646 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 NBPF10Q6P3W6 841 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 NBPF15Q8N660 670 aa12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 ABHD8Q96I13 439 aa12.26□□□□□ -0.45
CACNA1A-236ENST00000637117 HLFQ16534 295 aa12.25□□□□□ -0.45
CACNA1A-236ENST00000637117 RTF1Q92541 710 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-236ENST00000637117 PSMD1Q99460 953 aa12.25□□□□□ -0.45
CACNA1A-236ENST00000637117 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
CACNA1A-236ENST00000637117 DDX21Q9NR30 783 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1A-236ENST00000637117 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-236ENST00000637117 FECHP22830 423 aa12.24□□□□□ -0.45
CACNA1A-236ENST00000637117 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-236ENST00000637117 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
CACNA1A-236ENST00000637117 MCM10Q7L590 875 aa12.24□□□□□ -0.45
CACNA1A-236ENST00000637117 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
CACNA1A-236ENST00000637117 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 SLC34A2O95436 690 aa12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 AMHR2Q16671 573 aa12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 CC2D2BQ6DHV5 1058 aa12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
CACNA1A-236ENST00000637117 EPS15P42566 896 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 ECE1P42892 770 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 FMR1Q06787 632 aaKnown RBP eCLIP12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 PTGDRQ13258 359 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 CRY2Q49AN0 593 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 NGEFQ8N5V2 710 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 BEGAINQ9BUH8 593 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
CACNA1A-236ENST00000637117 HTATSF1O43719 755 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-236ENST00000637117 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-236ENST00000637117 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.45
CACNA1A-236ENST00000637117 TAF7Q15545 349 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-236ENST00000637117 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.45
CACNA1A-236ENST00000637117 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.45
CACNA1A-236ENST00000637117 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms