RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 MYO3AQ8NEV4 1616 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 CEP152O94986 1710 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 PLA2R1Q13018 1463 aa8.31□□□□□ -1.08
CLN8-210ENST00000636605 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
CLN8-210ENST00000636605 TET3O43151 1660 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 ZNF142P52746 1687 aaPredicted RBP8.3□□□□□ -1.08
CLN8-210ENST00000636605 GCC2Q8IWJ2 1684 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 EFCAB6Q5THR3 1501 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 IQGAP3Q86VI3 1631 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 EPHA4P54764 986 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 GTF2IP78347 998 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 FOXK2Q01167 660 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 FIGNL1Q6PIW4 674 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 SLCO4C1Q6ZQN7 724 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 ANKLE2Q86XL3 938 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 GDF2Q9UK05 429 aaPredicted RBP8.3□□□□□ -1.08
CLN8-210ENST00000636605 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
CLN8-210ENST00000636605 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 IGHA1P01876 353 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 BEND7Q8N7W2 519 aaPredicted RBP8.29□□□□□ -1.08
CLN8-210ENST00000636605 GOLGA6L1Q8N7Z2 621 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 NEDD1Q8NHV4 660 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 UCN2Q96RP3 112 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 SCHIP1Q9P0W5 487 aaPredicted RBP8.29□□□□□ -1.08
CLN8-210ENST00000636605 PCDHGC4Q9Y5F7 938 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 EID1Q9Y6B2 187 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 UGGT1Q9NYU2 1555 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 PTPRTO14522 1441 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 NOS1P29475 1434 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 SETD5Q9C0A6 1442 aa8.29□□□□□ -1.08
CLN8-210ENST00000636605 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 ITGB2P05107 769 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
CLN8-210ENST00000636605 CTBSQ01459 385 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 NBPF1Q3BBV0 1214 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 PODNQ7Z5L7 613 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 PLEKHM2Q8IWE5 1019 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 DCAF5Q96JK2 942 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
CLN8-210ENST00000636605 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
CLN8-210ENST00000636605 KDM5AP29375 1690 aaKnown RBP8.27□□□□□ -1.08
CLN8-210ENST00000636605 BMP4P12644 408 aa8.27□□□□□ -1.09
CLN8-210ENST00000636605 SNRPNP63162 240 aaKnown RBP8.27□□□□□ -1.09
CLN8-210ENST00000636605 IDI1Q13907 227 aa8.27□□□□□ -1.09
CLN8-210ENST00000636605 ZDHHC1Q8WTX9 485 aa8.27□□□□□ -1.09
CLN8-210ENST00000636605 CFAP65Q6ZU64 1925 aaKnown RBP8.27□□□□□ -1.09
CLN8-210ENST00000636605 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 BACH1O14867 736 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 RAD21O60216 631 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 ARAFP10398 606 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 FAM182BQ5T319 152 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 SAMD5Q5TGI4 173 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 GPAT2Q6NUI2 795 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 GALNT6Q8NCL4 622 aa8.26□□□□□ -1.09
CLN8-210ENST00000636605 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLN8-210ENST00000636605 ATXN7O15265 892 aaPredicted RBP8.25□□□□□ -1.09
CLN8-210ENST00000636605 FAM157BP0CG42 384 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 TNP2Q05952 138 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 SUZ12Q15022 739 aaKnown RBP8.25□□□□□ -1.09
CLN8-210ENST00000636605 PLA2G4EQ3MJ16 856 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 DEPDC4Q8N2C3 294 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.25□□□□□ -1.09
CLN8-210ENST00000636605 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 ZIC5Q96T25 663 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 GGA1Q9UJY5 639 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 KIAA1024Q9UPX6 916 aa8.25□□□□□ -1.09
CLN8-210ENST00000636605 TMEM2Q9UHN6 1383 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 MAPTP10636 758 aaKnown RBP8.24□□□□□ -1.09
CLN8-210ENST00000636605 EPXP11678 715 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 TATP17735 454 aaPredicted RBP8.24□□□□□ -1.09
CLN8-210ENST00000636605 TEAD4Q15561 434 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 AIDAQ96BJ3 306 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 MPHOSPH9Q99550 1183 aa8.24□□□□□ -1.09
CLN8-210ENST00000636605 USP17L3A6NCW0 530 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 USP17L4A6NCW7 530 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 EFSO43281 561 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 TXLNAP40222 546 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 CLDN10P78369 228 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 USP17L2Q6R6M4 530 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 USP17L1Q7RTZ2 530 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 TRIM50Q86XT4 487 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 C7orf43Q8WVR3 580 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 CABP1Q9NZU7 370 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 MED14O60244 1454 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 E9PCH4 1651 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 SLIT1O75093 1534 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
CLN8-210ENST00000636605 RAB3GAP2Q9H2M9 1393 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 STRCQ7RTU9 1775 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 DCDC2BA2VCK2 349 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 EML1O00423 815 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms