RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 ADAMTS4O75173 837 aa7.77□□□□□ -1.17
CLN5-212ENST00000636602 SOX11P35716 441 aa7.77□□□□□ -1.17
CLN5-212ENST00000636602 PCSK7Q16549 785 aa7.77□□□□□ -1.17
CLN5-212ENST00000636602 WASHC4Q2M389 1173 aa7.77□□□□□ -1.17
CLN5-212ENST00000636602 TTC9Q92623 222 aa7.77□□□□□ -1.17
CLN5-212ENST00000636602 TSPAN10Q9H1Z9 355 aaPredicted RBP7.77□□□□□ -1.17
CLN5-212ENST00000636602 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
CLN5-212ENST00000636602 HDGFL1Q5TGJ6 251 aa7.76□□□□□ -1.17
CLN5-212ENST00000636602 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
CLN5-212ENST00000636602 RAXQ9Y2V3 346 aa7.76□□□□□ -1.17
CLN5-212ENST00000636602 PPP1R15AO75807 674 aaPredicted RBP7.75□□□□□ -1.17
CLN5-212ENST00000636602 SKIP12755 728 aa7.75□□□□□ -1.17
CLN5-212ENST00000636602 SPINK2P20155 84 aa7.75□□□□□ -1.17
CLN5-212ENST00000636602 JAG1P78504 1218 aa7.75□□□□□ -1.17
CLN5-212ENST00000636602 ELMSAN1Q6PJG2 1045 aa7.75□□□□□ -1.17
CLN5-212ENST00000636602 TRAIPQ9BWF2 469 aa7.75□□□□□ -1.17
CLN5-212ENST00000636602 MRPL18Q9H0U6 180 aaKnown RBP7.75□□□□□ -1.17
CLN5-212ENST00000636602 ZBTB42B2RXF5 422 aa7.74□□□□□ -1.17
CLN5-212ENST00000636602 NCOA4Q13772 614 aa7.74□□□□□ -1.17
CLN5-212ENST00000636602 ACIN1Q9UKV3 1341 aaKnown RBP7.74□□□□□ -1.17
CLN5-212ENST00000636602 HIF1AQ16665 826 aa7.73□□□□□ -1.17
CLN5-212ENST00000636602 Q6ZS46 218 aa7.73□□□□□ -1.17
CLN5-212ENST00000636602 ALDH16A1Q8IZ83 802 aa7.73□□□□□ -1.17
CLN5-212ENST00000636602 ADAMTS19Q8TE59 1207 aa7.73□□□□□ -1.17
CLN5-212ENST00000636602 MAP3K6O95382 1288 aa7.72□□□□□ -1.17
CLN5-212ENST00000636602 INTS5Q6P9B9 1019 aaKnown RBP7.72□□□□□ -1.17
CLN5-212ENST00000636602 ZDHHC13Q8IUH4 622 aa7.72□□□□□ -1.17
CLN5-212ENST00000636602 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
CLN5-212ENST00000636602 STOML1Q9UBI4 398 aa7.72□□□□□ -1.17
CLN5-212ENST00000636602 DHX32Q7L7V1 743 aaKnown RBP7.71□□□□□ -1.18
CLN5-212ENST00000636602 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
CLN5-212ENST00000636602 RFX1P22670 979 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 GRIK1P39086 918 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 IER5Q5VY09 327 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 DTX1Q86Y01 620 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 AEBP1Q8IUX7 1158 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 TPCN2Q8NHX9 752 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 SMG9Q9H0W8 520 aaKnown RBP7.7□□□□□ -1.18
CLN5-212ENST00000636602 ZFATQ9P243 1243 aa7.7□□□□□ -1.18
CLN5-212ENST00000636602 PPP1R12BO60237 982 aaPredicted RBP7.69□□□□□ -1.18
CLN5-212ENST00000636602 GPLD1P80108 840 aa7.69□□□□□ -1.18
CLN5-212ENST00000636602 MLLT1Q03111 559 aaPredicted RBP7.69□□□□□ -1.18
CLN5-212ENST00000636602 PBXIP1Q96AQ6 731 aa7.69□□□□□ -1.18
CLN5-212ENST00000636602 ADGRE2Q9UHX3 823 aa7.69□□□□□ -1.18
CLN5-212ENST00000636602 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
CLN5-212ENST00000636602 WNT11O96014 354 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 GLB1P16278 677 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
CLN5-212ENST00000636602 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 DEPDC4Q8N2C3 294 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 AGGF1Q8N302 714 aaeCLIP7.68□□□□□ -1.18
CLN5-212ENST00000636602 PPP1R12CQ9BZL4 782 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 ALG2Q9H553 416 aa7.68□□□□□ -1.18
CLN5-212ENST00000636602 CCDC9Q9Y3X0 531 aaKnown RBP7.68□□□□□ -1.18
CLN5-212ENST00000636602 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.67□□□□□ -1.18
CLN5-212ENST00000636602 M0R2N6 131 aa7.67□□□□□ -1.18
CLN5-212ENST00000636602 C21orf2O43822 256 aa7.67□□□□□ -1.18
CLN5-212ENST00000636602 PDE4CQ08493 712 aa7.67□□□□□ -1.18
CLN5-212ENST00000636602 NFIAQ12857 509 aa7.67□□□□□ -1.18
CLN5-212ENST00000636602 CFAP70Q5T0N1 1121 aa7.67□□□□□ -1.18
CLN5-212ENST00000636602 UBL7Q96S82 380 aaPredicted RBP7.67□□□□□ -1.18
CLN5-212ENST00000636602 DMGDHQ9UI17 866 aaKnown RBP7.67□□□□□ -1.18
CLN5-212ENST00000636602 USP17L5A8MUK1 530 aa7.66□□□□□ -1.18
CLN5-212ENST00000636602 TGFBR3LH3BV60 316 aa7.66□□□□□ -1.18
CLN5-212ENST00000636602 DHX15O43143 795 aaKnown RBP7.66□□□□□ -1.18
CLN5-212ENST00000636602 EPB42P16452 691 aa7.66□□□□□ -1.18
CLN5-212ENST00000636602 KRT25Q7Z3Z0 450 aa7.66□□□□□ -1.18
CLN5-212ENST00000636602 STAG2Q8N3U4 1231 aa7.66□□□□□ -1.18
CLN5-212ENST00000636602 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
CLN5-212ENST00000636602 SRA1Q9HD15 236 aaKnown RBP7.66□□□□□ -1.18
CLN5-212ENST00000636602 PALM3A6NDB9 673 aaPredicted RBP7.65□□□□□ -1.18
CLN5-212ENST00000636602 PRR19A6NJB7 356 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 TARSP26639 723 aaKnown RBP7.65□□□□□ -1.18
CLN5-212ENST00000636602 OGFOD2Q6N063 350 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 HFE2Q6ZVN8 426 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.65□□□□□ -1.18
CLN5-212ENST00000636602 ARMC10Q8N2F6 343 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 IFT43Q96FT9 208 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 NGLY1Q96IV0 654 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 C2orf49Q9BVC5 232 aaPredicted RBP7.65□□□□□ -1.18
CLN5-212ENST00000636602 BCS1LQ9Y276 419 aa7.65□□□□□ -1.18
CLN5-212ENST00000636602 LMOD1P29536 600 aaPredicted RBP7.64□□□□□ -1.19
CLN5-212ENST00000636602 RANGAP1P46060 587 aaPredicted RBP7.64□□□□□ -1.19
CLN5-212ENST00000636602 ATP1A2P50993 1020 aa7.64□□□□□ -1.19
CLN5-212ENST00000636602 CLDN10P78369 228 aa7.64□□□□□ -1.19
CLN5-212ENST00000636602 SETDB1Q15047 1291 aa7.64□□□□□ -1.19
CLN5-212ENST00000636602 MAP4K3Q8IVH8 894 aa7.64□□□□□ -1.19
CLN5-212ENST00000636602 TSEN2Q8NCE0 465 aaKnown RBP7.64□□□□□ -1.19
CLN5-212ENST00000636602 UCN2Q96RP3 112 aa7.64□□□□□ -1.19
CLN5-212ENST00000636602 TFIP11Q9UBB9 837 aaKnown RBP7.64□□□□□ -1.19
CLN5-212ENST00000636602 ATAD2Q6PL18 1390 aa7.63□□□□□ -1.19
CLN5-212ENST00000636602 RARAP10276 462 aa7.63□□□□□ -1.19
CLN5-212ENST00000636602 EIF2AK2P19525 551 aaKnown RBP7.63□□□□□ -1.19
CLN5-212ENST00000636602 INPP5BP32019 993 aa7.63□□□□□ -1.19
CLN5-212ENST00000636602 IL22RA1Q8N6P7 574 aa7.63□□□□□ -1.19
CLN5-212ENST00000636602 SASH3O75995 380 aa7.62□□□□□ -1.19
CLN5-212ENST00000636602 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
CLN5-212ENST00000636602 NRLP54845 237 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms