RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 DLEC1Q9Y238 1755 aa19.51■□□□□ 0.71
CTSD-207ENST00000636571 KLRG2A4D1S0 409 aaPredicted RBP19.5■□□□□ 0.71
CTSD-207ENST00000636571 UBTFL1P0CB47 393 aaPredicted RBP19.5■□□□□ 0.71
CTSD-207ENST00000636571 KCNA3P22001 575 aa19.5■□□□□ 0.71
CTSD-207ENST00000636571 PDE6BP35913 854 aa19.5■□□□□ 0.71
CTSD-207ENST00000636571 BICC1Q9H694 974 aaKnown RBP19.5■□□□□ 0.71
CTSD-207ENST00000636571 LRRFIP2Q9Y608 721 aaKnown RBP19.5■□□□□ 0.71
CTSD-207ENST00000636571 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
CTSD-207ENST00000636571 SRGNP10124 158 aa19.49■□□□□ 0.71
CTSD-207ENST00000636571 CTSWP56202 376 aa19.49■□□□□ 0.71
CTSD-207ENST00000636571 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
CTSD-207ENST00000636571 TTLL11Q8NHH1 800 aa19.49■□□□□ 0.71
CTSD-207ENST00000636571 PLA2G12BQ9BX93 195 aa19.49■□□□□ 0.71
CTSD-207ENST00000636571 ANKRD44Q8N8A2 993 aa19.48■□□□□ 0.71
CTSD-207ENST00000636571 GREM2Q9H772 168 aa19.48■□□□□ 0.71
CTSD-207ENST00000636571 SEC31BQ9NQW1 1179 aa19.48■□□□□ 0.71
CTSD-207ENST00000636571 H0YIN7 160 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 TGFB2P61812 414 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 ZNF622Q969S3 477 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTSD-207ENST00000636571 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
CTSD-207ENST00000636571 CHMP3Q9Y3E7 222 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 SLX4Q8IY92 1834 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 SPEF2Q9C093 1822 aa19.47■□□□□ 0.71
CTSD-207ENST00000636571 GNAI3P08754 354 aa19.46■□□□□ 0.71
CTSD-207ENST00000636571 RPGRQ92834 1020 aaKnown RBP19.46■□□□□ 0.71
CTSD-207ENST00000636571 CSF1RP07333 972 aa19.45■□□□□ 0.7
CTSD-207ENST00000636571 CELF1Q92879 486 aaKnown RBP19.44■□□□□ 0.7
CTSD-207ENST00000636571 MASTLQ96GX5 879 aa19.44■□□□□ 0.7
CTSD-207ENST00000636571 ZBTB40Q9NUA8 1239 aa19.44■□□□□ 0.7
CTSD-207ENST00000636571 GNAI2P04899 355 aa19.44■□□□□ 0.7
CTSD-207ENST00000636571 NPR1P16066 1061 aa19.44■□□□□ 0.7
CTSD-207ENST00000636571 RABL6Q3YEC7 729 aaPredicted RBP19.44■□□□□ 0.7
CTSD-207ENST00000636571 CCDC152Q4G0S7 254 aa19.44■□□□□ 0.7
CTSD-207ENST00000636571 HSP90B1P14625 803 aaKnown RBP19.42■□□□□ 0.7
CTSD-207ENST00000636571 ITGA6P23229 1130 aa19.42■□□□□ 0.7
CTSD-207ENST00000636571 HOXA10P31260 410 aaPredicted RBP19.42■□□□□ 0.7
CTSD-207ENST00000636571 STYK1Q6J9G0 422 aa19.42■□□□□ 0.7
CTSD-207ENST00000636571 OLFM4Q6UX06 510 aa19.42■□□□□ 0.7
CTSD-207ENST00000636571 DDX46Q7L014 1031 aaKnown RBP19.42■□□□□ 0.7
CTSD-207ENST00000636571 KLHDC4Q8TBB5 520 aa19.42■□□□□ 0.7
CTSD-207ENST00000636571 ZNF594Q96JF6 807 aaPredicted RBP19.42■□□□□ 0.7
CTSD-207ENST00000636571 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
CTSD-207ENST00000636571 RBM17Q96I25 401 aaKnown RBP19.42■□□□□ 0.7
CTSD-207ENST00000636571 PNMA6EA0A0J9YXQ4 647 aa19.41■□□□□ 0.7
CTSD-207ENST00000636571 PRPF40BQ6NWY9 871 aaKnown RBP19.41■□□□□ 0.7
CTSD-207ENST00000636571 PIM2Q9P1W9 311 aa19.41■□□□□ 0.7
CTSD-207ENST00000636571 GRAPQ13588 217 aa19.39■□□□□ 0.7
CTSD-207ENST00000636571 TTLL6Q8N841 843 aa19.39■□□□□ 0.7
CTSD-207ENST00000636571 GRAPLQ8TC17 118 aaPredicted RBP19.39■□□□□ 0.7
CTSD-207ENST00000636571 CRAMP1Q96RY5 1269 aa19.39■□□□□ 0.7
CTSD-207ENST00000636571 BCS1LQ9Y276 419 aa19.39■□□□□ 0.7
CTSD-207ENST00000636571 RTL9Q8NET4 1388 aa19.39■□□□□ 0.69
CTSD-207ENST00000636571 CEP85Q6P2H3 762 aa19.39■□□□□ 0.69
CTSD-207ENST00000636571 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
CTSD-207ENST00000636571 PDZRN3Q9UPQ7 1066 aa19.39■□□□□ 0.69
CTSD-207ENST00000636571 RFX5P48382 616 aaPredicted RBP19.38■□□□□ 0.69
CTSD-207ENST00000636571 IFIT5Q13325 482 aaKnown RBP19.38■□□□□ 0.69
CTSD-207ENST00000636571 DALRD3Q5D0E6 543 aaKnown RBP19.38■□□□□ 0.69
CTSD-207ENST00000636571 ERICH6BQ5W0A0 696 aa19.38■□□□□ 0.69
CTSD-207ENST00000636571 CNKSR1Q969H4 720 aa19.38■□□□□ 0.69
CTSD-207ENST00000636571 ANKRD18BA2A2Z9 1011 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 SRGAP3O43295 1099 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 YBX3P16989 372 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■□□□ 11.5
CTSD-207ENST00000636571 CCDC57Q2TAC2 916 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 B4GALNT3Q6L9W6 998 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 SIRT2Q8IXJ6 389 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 PA2G4Q9UQ80 394 aaKnown RBP19.37■□□□□ 0.69
CTSD-207ENST00000636571 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 PPEF1O14829 653 aaPredicted RBP19.37■□□□□ 0.69
CTSD-207ENST00000636571 C21orf2O43822 256 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 ALDH1B1P30837 517 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
CTSD-207ENST00000636571 PPP4R2Q9NY27 417 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 PCDHB15Q9Y5E8 787 aa19.37■□□□□ 0.69
CTSD-207ENST00000636571 MTX1Q13505 466 aa19.36■□□□□ 0.69
CTSD-207ENST00000636571 ANKRD18AQ8IVF6 992 aa19.36■□□□□ 0.69
CTSD-207ENST00000636571 PUS3Q9BZE2 481 aaKnown RBP19.36■□□□□ 0.69
CTSD-207ENST00000636571 HDAC5Q9UQL6 1122 aa19.36■□□□□ 0.69
CTSD-207ENST00000636571 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
CTSD-207ENST00000636571 C7orf43Q8WVR3 580 aa19.35■□□□□ 0.69
CTSD-207ENST00000636571 CDC5LQ99459 802 aaKnown RBP19.35■□□□□ 0.69
CTSD-207ENST00000636571 PTPN12Q05209 780 aaKnown RBP19.34■□□□□ 0.69
CTSD-207ENST00000636571 SIL1Q9H173 461 aa19.34■□□□□ 0.69
CTSD-207ENST00000636571 LRRC37AA6NMS7 1700 aa19.34■□□□□ 0.69
CTSD-207ENST00000636571 LRRC24Q50LG9 513 aa19.34■□□□□ 0.69
CTSD-207ENST00000636571 TAF7LQ5H9L4 462 aa19.34■□□□□ 0.69
CTSD-207ENST00000636571 A0A1B0GUL6 1792 aa19.33■□□□□ 0.69
CTSD-207ENST00000636571 BBOX1O75936 387 aa19.33■□□□□ 0.68
CTSD-207ENST00000636571 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.68
CTSD-207ENST00000636571 POLA2Q14181 598 aa19.33■□□□□ 0.68
CTSD-207ENST00000636571 CHMP4BQ9H444 224 aaKnown RBP19.33■□□□□ 0.68
CTSD-207ENST00000636571 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
CTSD-207ENST00000636571 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
CTSD-207ENST00000636571 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
CTSD-207ENST00000636571 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
CTSD-207ENST00000636571 SSH3Q8TE77 659 aa19.32■□□□□ 0.68
CTSD-207ENST00000636571 MPHOSPH8Q99549 860 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms