RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 HDAC5Q9UQL6 1122 aa19.16■□□□□ 0.66
CHRNA7-212ENST00000636271 C4AP0C0L4 1744 aa19.16■□□□□ 0.66
CHRNA7-212ENST00000636271 ANKRD36CQ5JPF3 1778 aa19.16■□□□□ 0.66
CHRNA7-212ENST00000636271 SCN7AQ01118 1682 aa19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 POLA2Q14181 598 aa19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 GSE1Q14687 1217 aa19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 MX1P20591 662 aa19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 RABL6Q3YEC7 729 aaPredicted RBP19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 PARP10Q53GL7 1025 aa19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 COL23A1Q86Y22 540 aaPredicted RBP19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 USP26Q9BXU7 913 aa19.15■□□□□ 0.66
CHRNA7-212ENST00000636271 NTSR2O95665 410 aa19.14■□□□□ 0.65
CHRNA7-212ENST00000636271 GYS1P13807 737 aa19.14■□□□□ 0.65
CHRNA7-212ENST00000636271 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.65
CHRNA7-212ENST00000636271 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
CHRNA7-212ENST00000636271 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
CHRNA7-212ENST00000636271 LMBR1LQ6UX01 489 aa19.13■□□□□ 0.65
CHRNA7-212ENST00000636271 NUTM1Q86Y26 1132 aa19.13■□□□□ 0.65
CHRNA7-212ENST00000636271 CCDC125Q86Z20 511 aa19.13■□□□□ 0.65
CHRNA7-212ENST00000636271 CDHR2Q9BYE9 1310 aa19.13■□□□□ 0.65
CHRNA7-212ENST00000636271 IRS4O14654 1257 aaPredicted RBP19.12■□□□□ 0.65
CHRNA7-212ENST00000636271 REC8O95072 547 aa19.12■□□□□ 0.65
CHRNA7-212ENST00000636271 SLC15A2Q16348 729 aa19.12■□□□□ 0.65
CHRNA7-212ENST00000636271 SETDB2Q96T68 719 aa19.12■□□□□ 0.65
CHRNA7-212ENST00000636271 STAP2Q9UGK3 403 aa19.12■□□□□ 0.65
CHRNA7-212ENST00000636271 NFIXQ14938 502 aa19.12■□□□□ 0.65
CHRNA7-212ENST00000636271 SH3TC1Q8TE82 1336 aa19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 ERC2O15083 957 aa19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 SURF6O75683 361 aaKnown RBP19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 CD2BP2O95400 341 aaKnown RBP19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 HCLS1P14317 486 aaPredicted RBP19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 DDIT3P35638 169 aa19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 RABEP1Q15276 862 aa19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 TSHZ3Q63HK5 1081 aa19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 PA2G4Q9UQ80 394 aaKnown RBP19.11■□□□□ 0.65
CHRNA7-212ENST00000636271 K7ELQ4 463 aaPredicted RBP19.1■□□□□ 0.65
CHRNA7-212ENST00000636271 KLHDC4Q8TBB5 520 aa19.1■□□□□ 0.65
CHRNA7-212ENST00000636271 AOX1Q06278 1338 aa19.1■□□□□ 0.65
CHRNA7-212ENST00000636271 CCDC85AQ96PX6 553 aaPredicted RBP19.1■□□□□ 0.65
CHRNA7-212ENST00000636271 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
CHRNA7-212ENST00000636271 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
CHRNA7-212ENST00000636271 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.65
CHRNA7-212ENST00000636271 STK32BQ9NY57 414 aa19.09■□□□□ 0.65
CHRNA7-212ENST00000636271 CSF1RP07333 972 aa19.08■□□□□ 0.65
CHRNA7-212ENST00000636271 FLAD1Q8NFF5 587 aa19.08■□□□□ 0.65
CHRNA7-212ENST00000636271 IL1RAPL2Q9NP60 686 aa19.08■□□□□ 0.65
CHRNA7-212ENST00000636271 CHMP3Q9Y3E7 222 aa19.08■□□□□ 0.65
CHRNA7-212ENST00000636271 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
CHRNA7-212ENST00000636271 CCDC24Q8N4L8 307 aa19.08■□□□□ 0.64
CHRNA7-212ENST00000636271 TTLL11Q8NHH1 800 aa19.08■□□□□ 0.64
CHRNA7-212ENST00000636271 RHPN1Q8TCX5 695 aa19.08■□□□□ 0.64
CHRNA7-212ENST00000636271 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.64
CHRNA7-212ENST00000636271 PDE8AO60658 829 aa19.07■□□□□ 0.64
CHRNA7-212ENST00000636271 TM4SF1P30408 202 aa19.07■□□□□ 0.64
CHRNA7-212ENST00000636271 HSP90AB4PQ58FF6 505 aa19.07■□□□□ 0.64
CHRNA7-212ENST00000636271 CIZ1Q9ULV3 898 aaPredicted RBP19.07■□□□□ 0.64
CHRNA7-212ENST00000636271 HSP90AA1P07900 732 aaKnown RBP19.06■□□□□ 0.64
CHRNA7-212ENST00000636271 CTSWP56202 376 aa19.06■□□□□ 0.64
CHRNA7-212ENST00000636271 PTPN12Q05209 780 aaKnown RBP19.06■□□□□ 0.64
CHRNA7-212ENST00000636271 PDGFDQ9GZP0 370 aaPredicted RBP19.06■□□□□ 0.64
CHRNA7-212ENST00000636271 TRIM6-TRIM34B2RNG4 842 aa19.06■□□□□ 0.64
CHRNA7-212ENST00000636271 C3orf67Q6ZVT6 689 aa19.06■□□□□ 0.64
CHRNA7-212ENST00000636271 CARMIL3Q8ND23 1372 aa19.05■□□□□ 0.64
CHRNA7-212ENST00000636271 ABCC12Q96J65 1359 aa19.05■□□□□ 0.64
CHRNA7-212ENST00000636271 DDR1Q08345 913 aa19.05■□□□□ 0.64
CHRNA7-212ENST00000636271 SIL1Q9H173 461 aa19.05■□□□□ 0.64
CHRNA7-212ENST00000636271 GREM2Q9H772 168 aa19.05■□□□□ 0.64
CHRNA7-212ENST00000636271 GTF2E1P29083 439 aaPredicted RBP19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 MCM4P33991 863 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 TPTE2Q6XPS3 522 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 RILPL2Q969X0 211 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 ZNF594Q96JF6 807 aaPredicted RBP19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 ESYT1Q9BSJ8 1104 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 NYXQ9GZU5 481 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 COPRSQ9NQ92 184 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 COL24A1Q17RW2 1714 aa19.04■□□□□ 0.64
CHRNA7-212ENST00000636271 CHMLP26374 656 aa19.03■□□□□ 0.64
CHRNA7-212ENST00000636271 SLC10A5Q5PT55 438 aa19.03■□□□□ 0.64
CHRNA7-212ENST00000636271 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
CHRNA7-212ENST00000636271 NLGN1Q8N2Q7 840 aa19.03■□□□□ 0.64
CHRNA7-212ENST00000636271 POLRMTO00411 1230 aaKnown RBP19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 AK9Q5TCS8 1911 aa19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 SERPINB2P05120 415 aa19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 ITGA6P23229 1130 aa19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 CCDC57Q2TAC2 916 aa19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 PRR5LQ6MZQ0 368 aa19.02■□□□□ 0.64
CHRNA7-212ENST00000636271 SASH1O94885 1247 aa19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 DDX60Q8IY21 1712 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 IFIT5Q13325 482 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 OS9Q13438 667 aaPredicted RBP19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
CHRNA7-212ENST00000636271 ST18O60284 1047 aa19■□□□□ 0.63
CHRNA7-212ENST00000636271 G3BP1Q13283 466 aaKnown RBP eCLIP19■□□□□ 0.63
CHRNA7-212ENST00000636271 PUS3Q9BZE2 481 aaKnown RBP19■□□□□ 0.63
CHRNA7-212ENST00000636271 SEC31BQ9NQW1 1179 aa19■□□□□ 0.63
CHRNA7-212ENST00000636271 NPHP1O15259 732 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms