RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 NT5C2P49902 561 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 DDX19AQ9NUU7 478 aaKnown RBP5.09□□□□□ -1.59
SCN2A-210ENST00000636135 INTS1Q8N201 2190 aaKnown RBP5.09□□□□□ -1.59
SCN2A-210ENST00000636135 KIF5CO60282 957 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 PPFIBP1Q86W92 1011 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 HDAC9Q9UKV0 1011 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 ZHX1Q9UKY1 873 aaPredicted RBP5.09□□□□□ -1.59
SCN2A-210ENST00000636135 ERCC6L2Q5T890 1561 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 ARHGAP25P42331 645 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 CLIP2Q9UDT6 1046 aa5.09□□□□□ -1.59
SCN2A-210ENST00000636135 MCM4P33991 863 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 IRX4P78413 519 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 ARMC9Q7Z3E5 817 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 BICD2Q8TD16 824 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 RILPL2Q969X0 211 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 HMG20BQ9P0W2 317 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 CACNA1IQ9P0X4 2223 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 EDC4Q6P2E9 1401 aaKnown RBP5.09□□□□□ -1.6
SCN2A-210ENST00000636135 PLIN1O60240 522 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 RGPD1P0DJD0 1748 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 MAP3K11Q16584 847 aa5.09□□□□□ -1.6
SCN2A-210ENST00000636135 XRN1Q8IZH2 1706 aaKnown RBP5.09□□□□□ -1.6
SCN2A-210ENST00000636135 CCDC43Q96MW1 224 aaKnown RBP5.09□□□□□ -1.6
SCN2A-210ENST00000636135 MYO7BQ6PIF6 2116 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 TDRD6O60522 2096 aaKnown RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 GBP1P32455 592 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 PTPN14Q15678 1187 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 CHD5Q8TDI0 1954 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 LRRC37A3O60309 1634 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 CSPG5O95196 566 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 BRPF1P55201 1214 aaPredicted RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 SEPT7Q16181 437 aaKnown RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 TRIM22Q8IYM9 498 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 WDR66Q8TBY9 1149 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 RAB34Q9BZG1 259 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 TRPM6Q9BX84 2022 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 PXDNLA1KZ92 1463 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 UBE2HP62256 183 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 INTS4Q96HW7 963 aaKnown RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 SLIT1O75093 1534 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 LMNB2Q03252 620 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 SNX21Q969T3 373 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 FMNL2Q96PY5 1086 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 PARP4Q9UKK3 1724 aaKnown RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 DOCK11Q5JSL3 2073 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 LAMA4Q16363 1823 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 TULP4Q9NRJ4 1543 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 OFD1O75665 1012 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 RPAINQ86UA6 219 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 RASSF4Q9H2L5 321 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 ANO10Q9NW15 660 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 HNRNPMP52272 730 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 SMC1AQ14683 1233 aaKnown RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 HSP90AB2PQ58FF8 381 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 IFT74Q96LB3 600 aa5.08□□□□□ -1.6
SCN2A-210ENST00000636135 CCDC94Q9BW85 323 aaPredicted RBP5.08□□□□□ -1.6
SCN2A-210ENST00000636135 KIAA1217Q5T5P2 1943 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 C14orf93Q9H972 538 aaKnown RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 BABAM1Q9NWV8 329 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 RBM27Q9P2N5 1060 aaKnown RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 U3KPZ7 1027 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 CEP170BQ9Y4F5 1589 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 UQCRHLA0A096LP55 91 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 UQCRHP07919 91 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 TSGA10Q9BZW7 698 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 LRRC27Q9C0I9 530 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 PTPRCP08575 1304 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 ANK1P16157 1881 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 BMP2KLQ5H9B9 411 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 CEP112Q8N8E3 955 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 RABGAP1Q9Y3P9 1069 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 ST20-MTHFSA0A0A6YYL1 179 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 HEATR5AQ86XA9 2040 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 ATRXP46100 2492 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 LUC7L3O95232 432 aaKnown RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 POTEJP0CG39 1038 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 RASSF2P50749 326 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 TRAF1Q13077 416 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 EP400NLQ6ZTU2 488 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 CCDC110Q8TBZ0 833 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 ATP5DP30049 168 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 IRX3P78415 501 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 LTN1O94822 1766 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 HSPA4P34932 840 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 SPAG1Q07617 926 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 IKQ13123 557 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 APLFQ8IW19 511 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 CLASRPQ8N2M8 674 aaKnown RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 ALS2CR12Q96Q35 445 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 SEC62Q99442 399 aaKnown RBP5.07□□□□□ -1.6
SCN2A-210ENST00000636135 FERMT1Q9BQL6 677 aa5.07□□□□□ -1.6
SCN2A-210ENST00000636135 SYCP1Q15431 976 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 NAP1L3Q99457 506 aaPredicted RBP5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ITGB1BP2Q9UKP3 347 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 SSH2Q76I76 1423 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ANKRD62A6NC57 917 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ELL2O00472 640 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms