RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 LRRC24Q50LG9 513 aa15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 FBXO3Q9UK99 471 aa15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 LAMB2P55268 1798 aa15.24■□□□□ 0.03
CACNA1A-219ENST00000635917 ZNF609O15014 1411 aa15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 PUS3Q9BZE2 481 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 SLKQ9H2G2 1235 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
CACNA1A-219ENST00000635917 ANAPC15P60006 121 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 ARXQ96QS3 562 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 DBNDD2Q9BQY9 259 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 PALD1Q9ULE6 856 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 LRP5O75197 1615 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 AFF2P51816 1311 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 RAD50Q92878 1312 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 A0A0G2JS52 829 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 NBR1Q14596 966 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
CACNA1A-219ENST00000635917 HSPA4P34932 840 aa15.21■□□□□ 0.03
CACNA1A-219ENST00000635917 CTSWP56202 376 aa15.21■□□□□ 0.03
CACNA1A-219ENST00000635917 CCDC57Q2TAC2 916 aa15.21■□□□□ 0.03
CACNA1A-219ENST00000635917 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.02
CACNA1A-219ENST00000635917 SCN7AQ01118 1682 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 IRS4O14654 1257 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 NFKBIBQ15653 356 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 TRMT112Q9UI30 125 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 CASZ1Q86V15 1759 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 SPEF2Q9C093 1822 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 RIC1Q4ADV7 1423 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 GREM2Q9H772 168 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
CACNA1A-219ENST00000635917 PDE8AO60658 829 aa15.19■□□□□ 0.02
CACNA1A-219ENST00000635917 TIMM10P62072 90 aa15.19■□□□□ 0.02
CACNA1A-219ENST00000635917 AK7Q96M32 723 aa15.19■□□□□ 0.02
CACNA1A-219ENST00000635917 HAUS7Q99871 368 aa15.19■□□□□ 0.02
CACNA1A-219ENST00000635917 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
CACNA1A-219ENST00000635917 RFX7Q2KHR2 1363 aa15.18■□□□□ 0.02
CACNA1A-219ENST00000635917 IFIT5Q13325 482 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-219ENST00000635917 EDC3Q96F86 508 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-219ENST00000635917 MED23Q9ULK4 1368 aa15.18■□□□□ 0.02
CACNA1A-219ENST00000635917 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 HIP1O00291 1037 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 RGL2O15211 777 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 NTSR2O95665 410 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 ITGA6P23229 1130 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 RC3H1Q5TC82 1133 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 DIAPH3Q9NSV4 1193 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 KCNQ4P56696 695 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 KCNB2Q92953 911 aa15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 TRPC5Q9UL62 973 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-219ENST00000635917 A0A0D9SFI3 127 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 MYT1Q01538 1121 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 PTH1RQ03431 593 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 NMIQ13287 307 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 CEP126Q9P2H0 1117 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 SH3TC1Q8TE82 1336 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 COL24A1Q17RW2 1714 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 ARAP2Q8WZ64 1704 aa15.16■□□□□ 0.02
CACNA1A-219ENST00000635917 MCCP23508 829 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 CHMP5Q9NZZ3 219 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 ST18O60284 1047 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 UTP14AQ9BVJ6 771 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 CCDC171Q6TFL3 1326 aa15.15■□□□□ 0.02
CACNA1A-219ENST00000635917 C4AP0C0L4 1744 aa15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 C4BP0C0L5 1744 aa15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 ANKRD18BA2A2Z9 1011 aa15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
CACNA1A-219ENST00000635917 IL27Q8NEV9 243 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 301.9 ms