RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 A0A0D9SFI3 127 aa21.73■■□□□ 1.07
CLN5-206ENST00000635915 RASEFQ8IZ41 740 aa21.73■■□□□ 1.07
CLN5-206ENST00000635915 CHGBP05060 677 aa21.72■■□□□ 1.07
CLN5-206ENST00000635915 HSP90AB3PQ58FF7 597 aa21.72■■□□□ 1.07
CLN5-206ENST00000635915 FAM182BQ5T319 152 aa21.72■■□□□ 1.07
CLN5-206ENST00000635915 USP21Q9UK80 565 aa21.72■■□□□ 1.07
CLN5-206ENST00000635915 FAM177BA6PVY3 158 aa21.71■■□□□ 1.07
CLN5-206ENST00000635915 FNBP4Q8N3X1 1017 aaPredicted RBP21.71■■□□□ 1.07
CLN5-206ENST00000635915 PLA2G12BQ9BX93 195 aa21.71■■□□□ 1.07
CLN5-206ENST00000635915 ERVV-1B6SEH8 477 aa21.71■■□□□ 1.07
CLN5-206ENST00000635915 CSF1RP07333 972 aa21.71■■□□□ 1.07
CLN5-206ENST00000635915 SNX14Q9Y5W7 946 aa21.71■■□□□ 1.07
CLN5-206ENST00000635915 ANKRD36CQ5JPF3 1778 aa21.7■■□□□ 1.07
CLN5-206ENST00000635915 IRS4O14654 1257 aaPredicted RBP21.7■■□□□ 1.06
CLN5-206ENST00000635915 GREM2Q9H772 168 aa21.7■■□□□ 1.06
CLN5-206ENST00000635915 IFIT5Q13325 482 aaKnown RBP21.7■■□□□ 1.06
CLN5-206ENST00000635915 TAF7LQ5H9L4 462 aa21.7■■□□□ 1.06
CLN5-206ENST00000635915 TTLL11Q8NHH1 800 aa21.7■■□□□ 1.06
CLN5-206ENST00000635915 CIAO1O76071 339 aa21.69■■□□□ 1.06
CLN5-206ENST00000635915 DDX46Q7L014 1031 aaKnown RBP21.69■■□□□ 1.06
CLN5-206ENST00000635915 ZGPATQ8N5A5 531 aaKnown RBP21.69■■□□□ 1.06
CLN5-206ENST00000635915 CDHR2Q9BYE9 1310 aa21.69■■□□□ 1.06
CLN5-206ENST00000635915 A0A1B0GUL7 405 aa21.69■■□□□ 1.06
CLN5-206ENST00000635915 EPB41L2O43491 1005 aaKnown RBP21.69■■□□□ 1.06
CLN5-206ENST00000635915 ZNF34Q8IZ26 560 aa21.69■■□□□ 1.06
CLN5-206ENST00000635915 CTSWP56202 376 aa21.68■■□□□ 1.06
CLN5-206ENST00000635915 HAUS7Q99871 368 aa21.68■■□□□ 1.06
CLN5-206ENST00000635915 CIZ1Q9ULV3 898 aaPredicted RBP21.68■■□□□ 1.06
CLN5-206ENST00000635915 ZNF609O15014 1411 aa21.68■■□□□ 1.06
CLN5-206ENST00000635915 ITGA6P23229 1130 aa21.68■■□□□ 1.06
CLN5-206ENST00000635915 TNPO1Q92973 898 aaKnown RBP21.68■■□□□ 1.06
CLN5-206ENST00000635915 IL17RAQ96F46 866 aa21.68■■□□□ 1.06
CLN5-206ENST00000635915 CEP126Q9P2H0 1117 aa21.68■■□□□ 1.06
CLN5-206ENST00000635915 HIP1O00291 1037 aa21.67■■□□□ 1.06
CLN5-206ENST00000635915 PRPF40BQ6NWY9 871 aaKnown RBP21.67■■□□□ 1.06
CLN5-206ENST00000635915 ZNF589Q86UQ0 364 aaPredicted RBP21.67■■□□□ 1.06
CLN5-206ENST00000635915 TMX3Q96JJ7 454 aa21.67■■□□□ 1.06
CLN5-206ENST00000635915 GPR108Q9NPR9 543 aa21.67■■□□□ 1.06
CLN5-206ENST00000635915 CCDC171Q6TFL3 1326 aa21.67■■□□□ 1.06
CLN5-206ENST00000635915 MCM4P33991 863 aa21.67■■□□□ 1.06
CLN5-206ENST00000635915 CAMTA2O94983 1202 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 CPA1P15085 419 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 SUSD4Q5VX71 490 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 SMIM5Q71RC9 77 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 SMARCC1Q92922 1105 aaPredicted RBP21.66■■□□□ 1.06
CLN5-206ENST00000635915 EP400Q96L91 3159 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 ADORA1P30542 326 aa21.66■■□□□ 1.06
CLN5-206ENST00000635915 HCLS1P14317 486 aaPredicted RBP21.65■■□□□ 1.06
CLN5-206ENST00000635915 LINC00116Q8NCU8 138 aa21.65■■□□□ 1.06
CLN5-206ENST00000635915 GOLIM4O00461 696 aa21.65■■□□□ 1.06
CLN5-206ENST00000635915 SSFA2P28290 1259 aa21.65■■□□□ 1.06
CLN5-206ENST00000635915 SLFNL1Q499Z3 407 aa21.65■■□□□ 1.06
CLN5-206ENST00000635915 SPATA31A6Q5VVP1 1343 aa21.65■■□□□ 1.06
CLN5-206ENST00000635915 PKP1Q13835 747 aa21.64■■□□□ 1.06
CLN5-206ENST00000635915 CERKQ8TCT0 537 aa21.64■■□□□ 1.06
CLN5-206ENST00000635915 SEC62Q99442 399 aaKnown RBP21.64■■□□□ 1.06
CLN5-206ENST00000635915 RBM8AQ9Y5S9 174 aaKnown RBP21.64■■□□□ 1.06
CLN5-206ENST00000635915 MYH3P11055 1940 aa21.64■■□□□ 1.05
CLN5-206ENST00000635915 HSPA1LP34931 641 aa21.64■■□□□ 1.05
CLN5-206ENST00000635915 ADCK5Q3MIX3 580 aa21.64■■□□□ 1.05
CLN5-206ENST00000635915 LDHAL6AQ6ZMR3 332 aa21.64■■□□□ 1.05
CLN5-206ENST00000635915 KCNJ4P48050 445 aa21.63■■□□□ 1.05
CLN5-206ENST00000635915 MEX3CQ5U5Q3 659 aaKnown RBP21.63■■□□□ 1.05
CLN5-206ENST00000635915 LARP6Q9BRS8 491 aaKnown RBP21.63■■□□□ 1.05
CLN5-206ENST00000635915 MED23Q9ULK4 1368 aa21.63■■□□□ 1.05
CLN5-206ENST00000635915 PDE8AO60658 829 aa21.63■■□□□ 1.05
CLN5-206ENST00000635915 CCDC129Q6ZRS4 1044 aa21.63■■□□□ 1.05
CLN5-206ENST00000635915 NECTIN1Q15223 517 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 MAP4K1Q92918 833 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 PAG1Q9NWQ8 432 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 RIPOR2Q9Y4F9 1068 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 RIC1Q4ADV7 1423 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 ANKRD18BA2A2Z9 1011 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 CASTP20810 708 aaKnown RBP21.62■■□□□ 1.05
CLN5-206ENST00000635915 XAGE2Q96GT9 111 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 SNRKQ9NRH2 765 aa21.62■■□□□ 1.05
CLN5-206ENST00000635915 NIP7Q9Y221 180 aaKnown RBP eCLIP21.62■■□□□ 1.05
CLN5-206ENST00000635915 RREB1Q92766 1687 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 METTL24Q5JXM2 366 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 KBTBD3Q8NAB2 608 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 IFIT1P09914 478 aaKnown RBP21.61■■□□□ 1.05
CLN5-206ENST00000635915 MCM2P49736 904 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 COL9A3Q14050 684 aaPredicted RBP21.61■■□□□ 1.05
CLN5-206ENST00000635915 CNNM1Q9NRU3 951 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 TAF6LQ9Y6J9 622 aa21.61■■□□□ 1.05
CLN5-206ENST00000635915 SH3TC1Q8TE82 1336 aa21.6■■□□□ 1.05
CLN5-206ENST00000635915 GORABQ5T7V8 394 aa21.6■■□□□ 1.05
CLN5-206ENST00000635915 CREB3L3Q68CJ9 461 aa21.6■■□□□ 1.05
CLN5-206ENST00000635915 JAKMIP1Q96N16 626 aaKnown RBP21.6■■□□□ 1.05
CLN5-206ENST00000635915 UTP14AQ9BVJ6 771 aaKnown RBP21.6■■□□□ 1.05
CLN5-206ENST00000635915 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
CLN5-206ENST00000635915 TTC14Q96N46 770 aa21.59■■□□□ 1.05
CLN5-206ENST00000635915 AKAP2Q9Y2D5 859 aa21.59■■□□□ 1.05
CLN5-206ENST00000635915 TAF5LO75529 589 aa21.59■■□□□ 1.05
CLN5-206ENST00000635915 FKBP4Q02790 459 aaKnown RBP eCLIP21.59■■□□□ 1.05
CLN5-206ENST00000635915 GSE1Q14687 1217 aa21.59■■□□□ 1.05
CLN5-206ENST00000635915 AK2P54819 239 aa21.58■■□□□ 1.05
CLN5-206ENST00000635915 SCARF1Q14162 830 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms