RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 H7C1W4 665 aa5.38□□□□□ -1.55
SCN1A-210ENST00000635776 NPHP1O15259 732 aa5.38□□□□□ -1.55
SCN1A-210ENST00000635776 RNF113AO15541 343 aaKnown RBP5.38□□□□□ -1.55
SCN1A-210ENST00000635776 GNAT2P19087 354 aa5.38□□□□□ -1.55
SCN1A-210ENST00000635776 MAP3K12Q12852 859 aa5.38□□□□□ -1.55
SCN1A-210ENST00000635776 CREB3L3Q68CJ9 461 aa5.38□□□□□ -1.55
SCN1A-210ENST00000635776 PI4K2BQ8TCG2 481 aa5.38□□□□□ -1.55
SCN1A-210ENST00000635776 CDC5LQ99459 802 aaKnown RBP5.38□□□□□ -1.55
SCN1A-210ENST00000635776 SLC3A2P08195 630 aaKnown RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 METTL24Q5JXM2 366 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 MPHOSPH8Q99549 860 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 TMX4Q9H1E5 349 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 NWD1Q149M9 1564 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 RGL2O15211 777 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 TOM1O60784 492 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 TSGA10IPQ3SY00 556 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 TMTC2Q8N394 836 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ZSWIM6Q9HCJ5 1215 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ZNF142P52746 1687 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 SOS2Q07890 1332 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ERVV-1B6SEH8 477 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 GOLGA6L19H0YKK7 550 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 F13A1P00488 732 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ANXA1P04083 346 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 NMIQ13287 307 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 AKAP17AQ02040 695 aaKnown RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ZSCAN30Q86W11 494 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 PAG1Q9NWQ8 432 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 NFAT5O94916 1531 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 LDHAL6AQ6ZMR3 332 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 UBE2Q2Q8WVN8 375 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 LSG1Q9H089 658 aaKnown RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ANO8Q9HCE9 1232 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 TRMT112Q9UI30 125 aaKnown RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 NALCNQ8IZF0 1738 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 PPP2R5BQ15173 497 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 ATP2B3Q16720 1220 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 DHX32Q7L7V1 743 aaKnown RBP5.37□□□□□ -1.55
SCN1A-210ENST00000635776 CNNM2Q9H8M5 875 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 CDHR2Q9BYE9 1310 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 AK2P54819 239 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 BICD2Q8TD16 824 aa5.37□□□□□ -1.55
SCN1A-210ENST00000635776 PTCD1O75127 700 aaKnown RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 DDIT3P35638 169 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 SPATA32Q96LK8 384 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 HAUS7Q99871 368 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 FSD2A1L4K1 749 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 KCNQ3O43525 872 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 IL6STP40189 918 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 CCDC152Q4G0S7 254 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 GIGYF2Q6Y7W6 1299 aaKnown RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 NCOA7Q8NI08 942 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 TRIM22Q8IYM9 498 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 EAF2Q96CJ1 260 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 ZBTB3Q9H5J0 574 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 MAP2P11137 1827 aaKnown RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 PDE8AO60658 829 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 MTERF4Q7Z6M4 381 aaKnown RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 ESPNB1AK53 854 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 RPS6KB1P23443 525 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 GJB2P29033 226 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 CCDC83Q8IWF9 413 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 AXIN2Q9Y2T1 843 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 CYP27B1O15528 508 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 DDB1Q16531 1140 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 NUP62CLQ9H1M0 184 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 MROH5Q6ZUA9 1318 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 BECN2A8MW95 431 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 ZNF213O14771 459 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 KINO60870 393 aaKnown RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 SYTL4Q96C24 671 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 MTA3Q9BTC8 594 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 USP16Q9Y5T5 823 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 SH3TC1Q8TE82 1336 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 TFCP2Q12800 502 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 DNTTIP2Q5QJE6 756 aaKnown RBP5.36□□□□□ -1.55
SCN1A-210ENST00000635776 AIDAQ96BJ3 306 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 PLA2G12BQ9BX93 195 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 SNRKQ9NRH2 765 aa5.36□□□□□ -1.55
SCN1A-210ENST00000635776 MAP4K4O95819 1239 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 APPP05067 770 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 MAP3K11Q16584 847 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 CERS3Q8IU89 383 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 KCNB2Q92953 911 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 PA2G4Q9UQ80 394 aaKnown RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 CCDC178Q5BJE1 867 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 NAA16Q6N069 864 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 ZBTB38Q8NAP3 1195 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 TMEM87AQ8NBN3 555 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 KIF2CQ99661 725 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 XRCC6P12956 609 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 VPS37DQ86XT2 251 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 APPBP2Q92624 585 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 ATP5J2-PTCD1G3V325 749 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 MAP3K15Q6ZN16 1313 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 CYP2E1P05181 493 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 CLCN1P35523 988 aa5.35□□□□□ -1.55
SCN1A-210ENST00000635776 FKBP4Q02790 459 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCN1A-210ENST00000635776 CABLES1Q8TDN4 633 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms