RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 MCM6Q14566 821 aa19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 SBNO2Q9Y2G9 1366 aa19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 CKAP4Q07065 602 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 DDX46Q7L014 1031 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 PNISRQ8TF01 805 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 SEC62Q99442 399 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
CACNA1A-215ENST00000635727 DUSP27Q5VZP5 1158 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 STXBP4Q6ZWJ1 553 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 GJB2P29033 226 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 ARHGAP5Q13017 1502 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 SNW1Q13573 536 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 RRAGBQ5VZM2 374 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 IFT81Q8WYA0 676 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 GPIHBP1Q8IV16 184 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 GJA3Q9Y6H8 435 aa19.85■□□□□ 0.77
CACNA1A-215ENST00000635727 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 DACT3Q96B18 629 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 SMC6Q96SB8 1091 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 RSPH3Q86UC2 560 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 CCDC117Q8IWD4 279 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 GNG11P61952 73 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 CCDC170Q8IYT3 715 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 USP16Q9Y5T5 823 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 KSR1Q8IVT5 923 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 HSPA4P34932 840 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 NCBP1Q09161 790 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 GMNNO75496 209 aa19.84■□□□□ 0.77
CACNA1A-215ENST00000635727 TLDC2A0PJX2 215 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 MVPQ14764 893 aaKnown RBP19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 FEZ2Q9UHY8 353 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 PTPRGP23470 1445 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 ZEB2O60315 1214 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 METAP2P50579 478 aaKnown RBP eCLIP19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 MFSD6Q6ZSS7 791 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 TRIM6Q9C030 488 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 ST5P78524 1137 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 MAEAQ7L5Y9 396 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 DNAAF4Q8WXU2 420 aa19.83■□□□□ 0.77
CACNA1A-215ENST00000635727 ANO3Q9BYT9 981 aa19.83■□□□□ 0.76
CACNA1A-215ENST00000635727 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.83■□□□□ 0.76
CACNA1A-215ENST00000635727 V9GYY5 206 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-215ENST00000635727 RNASE9P60153 205 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-215ENST00000635727 PHAXQ9H814 394 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-215ENST00000635727 AGTPBP1Q9UPW5 1226 aa19.82■□□□□ 0.76
CACNA1A-215ENST00000635727 N4BP3O15049 544 aa19.82■□□□□ 0.76
CACNA1A-215ENST00000635727 PRKG1Q13976 671 aa19.82■□□□□ 0.76
CACNA1A-215ENST00000635727 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
CACNA1A-215ENST00000635727 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 PDE4BQ07343 736 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 ESPNB1AK53 854 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 MX1P20591 662 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 HSPA1LP34931 641 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 ADCY5O95622 1261 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 PRPF31Q8WWY3 499 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 KIFC2Q96AC6 838 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 AFG3L2Q9Y4W6 797 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 KMT5BQ4FZB7 885 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 IFIT1BQ5T764 474 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 NACA2Q9H009 215 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 AKR1B10O60218 316 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 KIF1BPQ96EK5 621 aa19.81■□□□□ 0.76
CACNA1A-215ENST00000635727 SSFA2P28290 1259 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 MARCKSP29966 332 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 FNBP4Q8N3X1 1017 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 MKRN1Q9UHC7 482 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 NACADO15069 1562 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 PPP1R7Q15435 360 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 GTPBP4Q9BZE4 634 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 DYNC1I1O14576 645 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 SPAG5Q96R06 1193 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 DCAF17Q5H9S7 520 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 MAP3K2Q9Y2U5 619 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 GTF2A1P52655 376 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 KIF5AQ12840 1032 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 SEPT6Q14141 434 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 MICALL1Q8N3F8 863 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 KIF5BP33176 963 aa19.8■□□□□ 0.76
CACNA1A-215ENST00000635727 FAM114A1Q8IWE2 563 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 IMPG2Q9BZV3 1241 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 E7EVH7 732 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 CHST3Q7LGC8 479 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 RABEP2Q9H5N1 569 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 SARNPP82979 210 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 SELENOOQ9BVL4 669 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 RTEL1-TNFRSF6BF6WH68 1400 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 SORBS3O60504 671 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 IARSP41252 1262 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 TRIM7Q9C029 511 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 BAG3O95817 575 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 FMNL3Q8IVF7 1028 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 NOD1Q9Y239 953 aa19.79■□□□□ 0.76
CACNA1A-215ENST00000635727 GAS8O95995 478 aa19.78■□□□□ 0.76
CACNA1A-215ENST00000635727 FOXD4Q12950 439 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-215ENST00000635727 SMARCC2Q8TAQ2 1214 aa19.78■□□□□ 0.76
CACNA1A-215ENST00000635727 ANKFY1Q9P2R3 1169 aa19.78■□□□□ 0.76
CACNA1A-215ENST00000635727 MCM4P33991 863 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms