RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CCDC194A0A1B0GVG4 234 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 PI4KAP2A4QPH2 592 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 RANBP6O60518 1105 aaKnown RBP13.37□□□□□ -0.27
COL11A1-211ENST00000635193 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL11A1-211ENST00000635193 CETN2P41208 172 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 HAND2P61296 217 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
COL11A1-211ENST00000635193 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 PI4KAP1Q8N8J0 262 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 MYRIPQ8NFW9 859 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 NCOA7Q8NI08 942 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 FBF1Q8TES7 1133 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 RBSNQ9H1K0 784 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
COL11A1-211ENST00000635193 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-211ENST00000635193 TMEM67Q5HYA8 995 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 RAB34Q9BZG1 259 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 CCDC6Q16204 474 aa13.36□□□□□ -0.27
COL11A1-211ENST00000635193 PYM1Q9BRP8 204 aaKnown RBP13.36□□□□□ -0.27
COL11A1-211ENST00000635193 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
COL11A1-211ENST00000635193 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 RSRC1Q96IZ7 334 aaKnown RBP13.35□□□□□ -0.27
COL11A1-211ENST00000635193 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
COL11A1-211ENST00000635193 ZBTB40Q9NUA8 1239 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL11A1-211ENST00000635193 TUBB4BP68371 445 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 SCLT1Q96NL6 688 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-211ENST00000635193 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 PHACTR2O75167 634 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 ZNF287Q9HBT7 754 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 STARD3NLO95772 234 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 TMEM266Q2M3C6 531 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 CTAGE1Q96RT6 745 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 SLC26A6Q9BXS9 759 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
COL11A1-211ENST00000635193 AK2P54819 239 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 ZC3H6P61129 1189 aaKnown RBP13.34□□□□□ -0.27
COL11A1-211ENST00000635193 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 HSP90AA4PQ58FG1 418 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 CPSF2Q9P2I0 782 aaKnown RBP13.34□□□□□ -0.27
COL11A1-211ENST00000635193 TMCO5BA8MYB1 307 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 STAMBPO95630 424 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 KLF18A0A0U1RQI7 1052 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 NAA25Q14CX7 972 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 PLEKHM2Q8IWE5 1019 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 C8orf58Q8NAV2 365 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 CCDC114Q96M63 670 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
COL11A1-211ENST00000635193 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.27
COL11A1-211ENST00000635193 POTEJP0CG39 1038 aa13.33□□□□□ -0.27
COL11A1-211ENST00000635193 Q6ZUG5 572 aa13.33□□□□□ -0.27
COL11A1-211ENST00000635193 ANKS4BQ8N8V4 417 aa13.33□□□□□ -0.27
COL11A1-211ENST00000635193 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.27
COL11A1-211ENST00000635193 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.27
COL11A1-211ENST00000635193 RIOK3O14730 519 aaKnown RBP13.33□□□□□ -0.28
COL11A1-211ENST00000635193 DRC1Q96MC2 740 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 RTL1A6NKG5 1358 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 CTAGE9A4FU28 777 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 AMPD3Q01432 767 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 SARNPP82979 210 aaKnown RBP13.33□□□□□ -0.28
COL11A1-211ENST00000635193 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 SLC5A1P13866 664 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-211ENST00000635193 HDXQ7Z353 690 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
COL11A1-211ENST00000635193 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
COL11A1-211ENST00000635193 CCDC40Q4G0X9 1142 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 DDX46Q7L014 1031 aaKnown RBP13.32□□□□□ -0.28
COL11A1-211ENST00000635193 TUBBP07437 444 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
COL11A1-211ENST00000635193 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 AKR1B10O60218 316 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 CYLC1P35663 651 aaPredicted RBP13.32□□□□□ -0.28
COL11A1-211ENST00000635193 RMND1Q9NWS8 449 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 UBA7P41226 1012 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 NOP2P46087 812 aaKnown RBP13.32□□□□□ -0.28
COL11A1-211ENST00000635193 RRAGBQ5VZM2 374 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
COL11A1-211ENST00000635193 CCDC155Q8N6L0 562 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 FAM76AQ8TAV0 307 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 CALML4Q96GE6 196 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 CEP83Q9Y592 693 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms