RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 USP17L18D6R9N7 530 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 USP17L22D6RA61 530 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 USP17L17D6RBQ6 530 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 USP17L19D6RCP7 530 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 USP17L20D6RJB6 530 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 USP17L24Q0WX57 530 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 IGF2-ASQ6U949 168 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 PPP1R12CQ9BZL4 782 aa6.93□□□□□ -1.3
PHACTR4-208ENST00000633167 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
PHACTR4-208ENST00000633167 CPB1P15086 417 aa6.92□□□□□ -1.3
PHACTR4-208ENST00000633167 ELMSAN1Q6PJG2 1045 aa6.92□□□□□ -1.3
PHACTR4-208ENST00000633167 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
PHACTR4-208ENST00000633167 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.92□□□□□ -1.31e-7■■■■■ 72.7
PHACTR4-208ENST00000633167 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
PHACTR4-208ENST00000633167 EGFRP00533 1210 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 RARAP10276 462 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 WEE1P30291 646 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 NRLP54845 237 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 C11orf91Q3C1V1 193 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 SLC51AQ86UW1 340 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 DCAF11Q8TEB1 546 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 VRTNQ9H8Y1 702 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 QTRT2Q9H974 415 aaKnown RBP6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 KLK14Q9P0G3 267 aa6.91□□□□□ -1.3
PHACTR4-208ENST00000633167 ZBTB42B2RXF5 422 aa6.9□□□□□ -1.3
PHACTR4-208ENST00000633167 MICAL2O94851 1124 aa6.9□□□□□ -1.3
PHACTR4-208ENST00000633167 DGKZQ13574 1117 aa6.9□□□□□ -1.3
PHACTR4-208ENST00000633167 IFT43Q96FT9 208 aa6.9□□□□□ -1.3
PHACTR4-208ENST00000633167 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
PHACTR4-208ENST00000633167 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
PHACTR4-208ENST00000633167 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
PHACTR4-208ENST00000633167 CLUAP1Q96AJ1 413 aa6.89□□□□□ -1.31
PHACTR4-208ENST00000633167 VTI1AQ96AJ9 217 aa6.89□□□□□ -1.31
PHACTR4-208ENST00000633167 ARXQ96QS3 562 aa6.89□□□□□ -1.31
PHACTR4-208ENST00000633167 RNF112Q9ULX5 631 aa6.89□□□□□ -1.31
PHACTR4-208ENST00000633167 A6NJR5 290 aa6.88□□□□□ -1.31
PHACTR4-208ENST00000633167 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
PHACTR4-208ENST00000633167 HOXD8P13378 290 aaPredicted RBP6.88□□□□□ -1.31
PHACTR4-208ENST00000633167 TARSP26639 723 aaKnown RBP6.88□□□□□ -1.31
PHACTR4-208ENST00000633167 NOS3P29474 1203 aa6.88□□□□□ -1.31
PHACTR4-208ENST00000633167 TLR7Q9NYK1 1049 aaKnown RBP6.88□□□□□ -1.31
PHACTR4-208ENST00000633167 DLL1O00548 723 aa6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 SASH3O75995 380 aa6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 SOX18P35713 384 aa6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 KRT25Q7Z3Z0 450 aa6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 MAP4K3Q8IVH8 894 aa6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 TMEM130Q8N3G9 435 aa6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
PHACTR4-208ENST00000633167 DEAF1O75398 565 aaPredicted RBP6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 PRKCSHP14314 528 aaPredicted RBP6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 LMOD1P29536 600 aaPredicted RBP6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 PLAURQ03405 335 aa6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 DZIP1LQ8IYY4 767 aaKnown RBP6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 MRPL18Q9H0U6 180 aaKnown RBP6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
PHACTR4-208ENST00000633167 OPLAHO14841 1288 aa6.85□□□□□ -1.31
PHACTR4-208ENST00000633167 PSAPP07602 524 aa6.85□□□□□ -1.31
PHACTR4-208ENST00000633167 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
PHACTR4-208ENST00000633167 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
PHACTR4-208ENST00000633167 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
PHACTR4-208ENST00000633167 AKTIPQ9H8T0 292 aa6.85□□□□□ -1.31
PHACTR4-208ENST00000633167 LOC102724428A0A0B4J2F2 783 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 XYLBO75191 536 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 LGR5O75473 907 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 SIK1P57059 783 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 FAM200AQ8TCP9 573 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 RBSNQ9H1K0 784 aa6.84□□□□□ -1.31
PHACTR4-208ENST00000633167 GHRHP01286 108 aa6.83□□□□□ -1.32
PHACTR4-208ENST00000633167 TREML1Q86YW5 311 aa6.83□□□□□ -1.32
PHACTR4-208ENST00000633167 LRFN2Q9ULH4 789 aa6.83□□□□□ -1.32
PHACTR4-208ENST00000633167 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
PHACTR4-208ENST00000633167 Q6ZS46 218 aa6.82□□□□□ -1.32
PHACTR4-208ENST00000633167 RGL4Q8IZJ4 473 aa6.82□□□□□ -1.32
PHACTR4-208ENST00000633167 KCNMB2Q9Y691 235 aa6.82□□□□□ -1.32
PHACTR4-208ENST00000633167 F8W735 103 aaPredicted RBP6.81□□□□□ -1.32
PHACTR4-208ENST00000633167 MMP20O60882 483 aa6.81□□□□□ -1.32
PHACTR4-208ENST00000633167 TMEM132AQ24JP5 1023 aa6.81□□□□□ -1.32
PHACTR4-208ENST00000633167 HFE2Q6ZVN8 426 aa6.81□□□□□ -1.32
PHACTR4-208ENST00000633167 CMTR1Q8N1G2 835 aaKnown RBP6.81□□□□□ -1.32
PHACTR4-208ENST00000633167 KRTAP4-12Q9BQ66 201 aa6.81□□□□□ -1.32
PHACTR4-208ENST00000633167 GSC2O15499 205 aa6.8□□□□□ -1.32
PHACTR4-208ENST00000633167 COX20Q5RI15 118 aa6.8□□□□□ -1.32
PHACTR4-208ENST00000633167 CFAP70Q5T0N1 1121 aa6.8□□□□□ -1.32
PHACTR4-208ENST00000633167 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
PHACTR4-208ENST00000633167 COL26A1Q96A83 441 aa6.8□□□□□ -1.32
PHACTR4-208ENST00000633167 FAM13BQ9NYF5 915 aa6.8□□□□□ -1.32
PHACTR4-208ENST00000633167 FSTP19883 344 aa6.79□□□□□ -1.32
PHACTR4-208ENST00000633167 BRD2P25440 801 aaKnown RBP6.79□□□□□ -1.32
PHACTR4-208ENST00000633167 FKBP5Q13451 457 aaPredicted RBP6.79□□□□□ -1.32
PHACTR4-208ENST00000633167 SETDB1Q15047 1291 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms