RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 IPO8O15397 1037 aaKnown RBP23.64■■□□□ 1.38
PNKP-224ENST00000631020 TRIM27P14373 513 aa23.64■■□□□ 1.38
PNKP-224ENST00000631020 PSMD1Q99460 953 aa23.64■■□□□ 1.38
PNKP-224ENST00000631020 LAMB2P55268 1798 aa23.64■■□□□ 1.38
PNKP-224ENST00000631020 PLIN1O60240 522 aa23.64■■□□□ 1.37
PNKP-224ENST00000631020 IGKV5-2P06315 115 aa23.64■■□□□ 1.37
PNKP-224ENST00000631020 ZKSCAN2Q63HK3 967 aa23.64■■□□□ 1.37
PNKP-224ENST00000631020 ATF7IPQ6VMQ6 1270 aa23.64■■□□□ 1.37
PNKP-224ENST00000631020 API5Q9BZZ5 524 aaKnown RBP23.64■■□□□ 1.37
PNKP-224ENST00000631020 SH3TC1Q8TE82 1336 aa23.63■■□□□ 1.37
PNKP-224ENST00000631020 BEND3Q5T5X7 828 aa23.63■■□□□ 1.37
PNKP-224ENST00000631020 APLP1P51693 650 aa23.62■■□□□ 1.37
PNKP-224ENST00000631020 TRIM28Q13263 835 aaKnown RBP23.62■■□□□ 1.37
PNKP-224ENST00000631020 SLC4A10Q6U841 1118 aa23.62■■□□□ 1.37
PNKP-224ENST00000631020 C3orf67Q6ZVT6 689 aa23.62■■□□□ 1.37
PNKP-224ENST00000631020 TRMT112Q9UI30 125 aaKnown RBP23.62■■□□□ 1.37
PNKP-224ENST00000631020 CWF19L2Q2TBE0 894 aaKnown RBP23.61■■□□□ 1.37
PNKP-224ENST00000631020 OLFM4Q6UX06 510 aa23.61■■□□□ 1.37
PNKP-224ENST00000631020 SMC1BQ8NDV3 1235 aa23.6■■□□□ 1.37
PNKP-224ENST00000631020 CLUAP1Q96AJ1 413 aa23.6■■□□□ 1.37
PNKP-224ENST00000631020 NEURL1BA8MQ27 555 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 POTECB2RU33 542 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 NEXNQ0ZGT2 675 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 DDX60Q8IY21 1712 aaKnown RBP23.59■■□□□ 1.37
PNKP-224ENST00000631020 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 ZNF277Q9NRM2 450 aaPredicted RBP23.59■■□□□ 1.37
PNKP-224ENST00000631020 ABCC4O15439 1325 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 SCN4AP35499 1836 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 PPEF1O14829 653 aaPredicted RBP23.59■■□□□ 1.37
PNKP-224ENST00000631020 IARSP41252 1262 aaKnown RBP23.59■■□□□ 1.37
PNKP-224ENST00000631020 SYNE4Q8N205 404 aa23.59■■□□□ 1.37
PNKP-224ENST00000631020 RLBP1P12271 317 aa23.58■■□□□ 1.36
PNKP-224ENST00000631020 CCDC191Q8NCU4 936 aa23.58■■□□□ 1.36
PNKP-224ENST00000631020 L3MBTL3Q96JM7 780 aaPredicted RBP23.57■■□□□ 1.36
PNKP-224ENST00000631020 BBOX1O75936 387 aa23.56■■□□□ 1.36
PNKP-224ENST00000631020 HCLS1P14317 486 aaPredicted RBP23.56■■□□□ 1.36
PNKP-224ENST00000631020 SRCIN1Q9C0H9 1055 aa23.56■■□□□ 1.36
PNKP-224ENST00000631020 TMX4Q9H1E5 349 aaPredicted RBP23.56■■□□□ 1.36
PNKP-224ENST00000631020 CWC25Q9NXE8 425 aaPredicted RBP23.56■■□□□ 1.36
PNKP-224ENST00000631020 ATP6V0A2Q9Y487 856 aa23.56■■□□□ 1.36
PNKP-224ENST00000631020 FZD9O00144 591 aa23.55■■□□□ 1.36
PNKP-224ENST00000631020 DDNO94850 711 aaPredicted RBP23.55■■□□□ 1.36
PNKP-224ENST00000631020 GCKRQ14397 625 aa23.55■■□□□ 1.36
PNKP-224ENST00000631020 INTS3Q68E01 1043 aaKnown RBP23.55■■□□□ 1.36
PNKP-224ENST00000631020 DZIP1LQ8IYY4 767 aaKnown RBP23.55■■□□□ 1.36
PNKP-224ENST00000631020 IQCA1LA6NCM1 817 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 ALDH1L1O75891 902 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 RRP1P56182 461 aaKnown RBP23.54■■□□□ 1.36
PNKP-224ENST00000631020 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 DDX46Q7L014 1031 aaKnown RBP23.54■■□□□ 1.36
PNKP-224ENST00000631020 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 JDP2Q8WYK2 163 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 VPS33BQ9H267 617 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 SUPT16HQ9Y5B9 1047 aaKnown RBP23.54■■□□□ 1.36
PNKP-224ENST00000631020 CCT4P50991 539 aaKnown RBP23.54■■□□□ 1.36
PNKP-224ENST00000631020 TMC4Q7Z404 712 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
PNKP-224ENST00000631020 JARID2Q92833 1246 aaPredicted RBP23.54■■□□□ 1.36
PNKP-224ENST00000631020 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.53■■□□□ 1.36
PNKP-224ENST00000631020 FAM89AQ96GI7 184 aa23.53■■□□□ 1.36
PNKP-224ENST00000631020 HSP90B1P14625 803 aaKnown RBP23.52■■□□□ 1.36
PNKP-224ENST00000631020 GRAPQ13588 217 aa23.52■■□□□ 1.36
PNKP-224ENST00000631020 SF3B3Q15393 1217 aaKnown RBP23.52■■□□□ 1.36
PNKP-224ENST00000631020 RTL5Q5HYW3 569 aaPredicted RBP23.52■■□□□ 1.36
PNKP-224ENST00000631020 SP8Q8IXZ3 490 aa23.52■■□□□ 1.36
PNKP-224ENST00000631020 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
PNKP-224ENST00000631020 LRRC37AA6NMS7 1700 aa23.51■■□□□ 1.35
PNKP-224ENST00000631020 H7C1W4 665 aa23.51■■□□□ 1.35
PNKP-224ENST00000631020 FTSJ3Q8IY81 847 aaKnown RBP23.51■■□□□ 1.35
PNKP-224ENST00000631020 ZBTB38Q8NAP3 1195 aaPredicted RBP23.51■■□□□ 1.35
PNKP-224ENST00000631020 ZNF541Q9H0D2 1346 aa23.51■■□□□ 1.35
PNKP-224ENST00000631020 PCCAP05165 728 aaPredicted RBP23.5■■□□□ 1.35
PNKP-224ENST00000631020 SUPT20HQ8NEM7 779 aa23.5■■□□□ 1.35
PNKP-224ENST00000631020 RTFDC1Q9BY42 306 aaPredicted RBP23.5■■□□□ 1.35
PNKP-224ENST00000631020 USP44Q9H0E7 712 aa23.5■■□□□ 1.35
PNKP-224ENST00000631020 CASP7P55210 303 aa23.49■■□□□ 1.35
PNKP-224ENST00000631020 PDE3AQ14432 1141 aa23.49■■□□□ 1.35
PNKP-224ENST00000631020 GPC2Q8N158 579 aa23.49■■□□□ 1.35
PNKP-224ENST00000631020 COL4A5P29400 1685 aa23.49■■□□□ 1.35
PNKP-224ENST00000631020 TAF1P21675 1872 aa23.49■■□□□ 1.35
PNKP-224ENST00000631020 GRM8O00222 908 aa23.48■■□□□ 1.35
PNKP-224ENST00000631020 IRS4O14654 1257 aaPredicted RBP23.48■■□□□ 1.35
PNKP-224ENST00000631020 NBPF7P0C2Y1 421 aaPredicted RBP23.48■■□□□ 1.35
PNKP-224ENST00000631020 MS4A1P11836 297 aa23.48■■□□□ 1.35
PNKP-224ENST00000631020 UBE3BQ7Z3V4 1068 aa23.48■■□□□ 1.35
PNKP-224ENST00000631020 LARGE2Q8N3Y3 721 aa23.48■■□□□ 1.35
PNKP-224ENST00000631020 DNAJC5GQ8N7S2 189 aa23.48■■□□□ 1.35
PNKP-224ENST00000631020 EIF6P56537 245 aaKnown RBP23.47■■□□□ 1.35
PNKP-224ENST00000631020 C9orf78Q9NZ63 289 aaPredicted RBP23.47■■□□□ 1.35
PNKP-224ENST00000631020 DPP8Q6V1X1 898 aaPredicted RBP23.46■■□□□ 1.35
PNKP-224ENST00000631020 TAF1DQ9H5J8 278 aaPredicted RBP23.46■■□□□ 1.35
PNKP-224ENST00000631020 COG6Q9Y2V7 657 aa23.46■■□□□ 1.35
PNKP-224ENST00000631020 UTYO14607 1347 aa23.46■■□□□ 1.35
PNKP-224ENST00000631020 CHADLQ6NUI6 762 aa23.45■■□□□ 1.34
PNKP-224ENST00000631020 SLC51AQ86UW1 340 aa23.45■■□□□ 1.34
PNKP-224ENST00000631020 ITPRIPQ8IWB1 547 aa23.45■■□□□ 1.34
PNKP-224ENST00000631020 MPNDQ8N594 471 aa23.45■■□□□ 1.34
PNKP-224ENST00000631020 HACL1Q9UJ83 578 aa23.45■■□□□ 1.34
PNKP-224ENST00000631020 CDHR2Q9BYE9 1310 aa23.44■■□□□ 1.34
PNKP-224ENST00000631020 PPIP5K2O43314 1243 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms