RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 A0A0G2JLW4 131 aa20.92■□□□□ 0.94
CDC42EP4-209ENST00000630622 H0YIN7 160 aa20.92■□□□□ 0.94
CDC42EP4-209ENST00000630622 TAF1P21675 1872 aa20.92■□□□□ 0.94
CDC42EP4-209ENST00000630622 HOXA10P31260 410 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-209ENST00000630622 TTLL11Q8NHH1 800 aa20.91■□□□□ 0.94
CDC42EP4-209ENST00000630622 DDX19BQ9UMR2 479 aa20.91■□□□□ 0.94
CDC42EP4-209ENST00000630622 CACNA1SQ13698 1873 aa20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 COL4A1P02462 1669 aa20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 CSF1RP07333 972 aa20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 NPR1P16066 1061 aa20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 ANKRD44Q8N8A2 993 aa20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 BICC1Q9H694 974 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 LRRFIP2Q9Y608 721 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-209ENST00000630622 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
CDC42EP4-209ENST00000630622 RABL6Q3YEC7 729 aaPredicted RBP20.89■□□□□ 0.93
CDC42EP4-209ENST00000630622 STYK1Q6J9G0 422 aa20.89■□□□□ 0.93
CDC42EP4-209ENST00000630622 RPGRQ92834 1020 aaKnown RBP20.89■□□□□ 0.93
CDC42EP4-209ENST00000630622 MASTLQ96GX5 879 aa20.89■□□□□ 0.93
CDC42EP4-209ENST00000630622 CCDC152Q4G0S7 254 aa20.88■□□□□ 0.93
CDC42EP4-209ENST00000630622 LMBR1LQ6UX01 489 aa20.88■□□□□ 0.93
CDC42EP4-209ENST00000630622 GREM2Q9H772 168 aa20.88■□□□□ 0.93
CDC42EP4-209ENST00000630622 ZBTB40Q9NUA8 1239 aa20.88■□□□□ 0.93
CDC42EP4-209ENST00000630622 HDAC5Q9UQL6 1122 aa20.88■□□□□ 0.93
CDC42EP4-209ENST00000630622 SLX4Q8IY92 1834 aa20.88■□□□□ 0.93
CDC42EP4-209ENST00000630622 GNAI2P04899 355 aa20.87■□□□□ 0.93
CDC42EP4-209ENST00000630622 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP4-209ENST00000630622 CRAMP1Q96RY5 1269 aa20.87■□□□□ 0.93
CDC42EP4-209ENST00000630622 CRBNQ96SW2 442 aa20.87■□□□□ 0.93
CDC42EP4-209ENST00000630622 FAM161AQ3B820 660 aa20.86■□□□□ 0.93
CDC42EP4-209ENST00000630622 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDC42EP4-209ENST00000630622 RBM17Q96I25 401 aaKnown RBP20.86■□□□□ 0.93
CDC42EP4-209ENST00000630622 DDX46Q7L014 1031 aaKnown RBP20.85■□□□□ 0.93
CDC42EP4-209ENST00000630622 CNKSR1Q969H4 720 aa20.85■□□□□ 0.93
CDC42EP4-209ENST00000630622 SEC31BQ9NQW1 1179 aa20.85■□□□□ 0.93
CDC42EP4-209ENST00000630622 PIM2Q9P1W9 311 aa20.85■□□□□ 0.93
CDC42EP4-209ENST00000630622 SPEF2Q9C093 1822 aa20.85■□□□□ 0.93
CDC42EP4-209ENST00000630622 ARFGEF1Q9Y6D6 1849 aa20.84■□□□□ 0.93
CDC42EP4-209ENST00000630622 TTLL6Q8N841 843 aa20.84■□□□□ 0.93
CDC42EP4-209ENST00000630622 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
CDC42EP4-209ENST00000630622 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
CDC42EP4-209ENST00000630622 ITGA6P23229 1130 aa20.83■□□□□ 0.93
CDC42EP4-209ENST00000630622 ALDH1B1P30837 517 aa20.83■□□□□ 0.93
CDC42EP4-209ENST00000630622 MTX1Q13505 466 aa20.83■□□□□ 0.93
CDC42EP4-209ENST00000630622 GRAPQ13588 217 aa20.83■□□□□ 0.93
CDC42EP4-209ENST00000630622 GRAPLQ8TC17 118 aaPredicted RBP20.83■□□□□ 0.93
CDC42EP4-209ENST00000630622 CELF1Q92879 486 aaKnown RBP20.83■□□□□ 0.93
CDC42EP4-209ENST00000630622 PRPF40BQ6NWY9 871 aaKnown RBP20.82■□□□□ 0.92
CDC42EP4-209ENST00000630622 CHMP3Q9Y3E7 222 aa20.82■□□□□ 0.92
CDC42EP4-209ENST00000630622 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
CDC42EP4-209ENST00000630622 DALRD3Q5D0E6 543 aaKnown RBP20.81■□□□□ 0.92
CDC42EP4-209ENST00000630622 WWC3Q9ULE0 1092 aa20.81■□□□□ 0.92
CDC42EP4-209ENST00000630622 ANKRD18BA2A2Z9 1011 aa20.8■□□□□ 0.92
CDC42EP4-209ENST00000630622 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
CDC42EP4-209ENST00000630622 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
CDC42EP4-209ENST00000630622 IFIT5Q13325 482 aaKnown RBP20.8■□□□□ 0.92
CDC42EP4-209ENST00000630622 CDC5LQ99459 802 aaKnown RBP20.8■□□□□ 0.92
CDC42EP4-209ENST00000630622 BBOX1O75936 387 aa20.79■□□□□ 0.92
CDC42EP4-209ENST00000630622 RFX5P48382 616 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP4-209ENST00000630622 CCDC57Q2TAC2 916 aa20.79■□□□□ 0.92
CDC42EP4-209ENST00000630622 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
CDC42EP4-209ENST00000630622 EXOC6Q8TAG9 804 aa20.79■□□□□ 0.92
CDC42EP4-209ENST00000630622 C7orf43Q8WVR3 580 aa20.79■□□□□ 0.92
CDC42EP4-209ENST00000630622 PNMA6EA0A0J9YXQ4 647 aa20.78■□□□□ 0.92
CDC42EP4-209ENST00000630622 PPEF1O14829 653 aaPredicted RBP20.78■□□□□ 0.92
CDC42EP4-209ENST00000630622 SLC51AQ86UW1 340 aa20.78■□□□□ 0.92
CDC42EP4-209ENST00000630622 ANKRD18AQ8IVF6 992 aa20.78■□□□□ 0.92
CDC42EP4-209ENST00000630622 BCS1LQ9Y276 419 aa20.78■□□□□ 0.92
CDC42EP4-209ENST00000630622 YBX3P16989 372 aaKnown RBP eCLIP20.77■□□□□ 0.92
CDC42EP4-209ENST00000630622 ATP8B2P98198 1209 aa20.77■□□□□ 0.92
CDC42EP4-209ENST00000630622 ZNF594Q96JF6 807 aaPredicted RBP20.77■□□□□ 0.92
CDC42EP4-209ENST00000630622 ATP6V0A2Q9Y487 856 aa20.77■□□□□ 0.92
CDC42EP4-209ENST00000630622 A0A1B0GUL6 1792 aa20.77■□□□□ 0.91
CDC42EP4-209ENST00000630622 SRGAP3O43295 1099 aa20.76■□□□□ 0.91
CDC42EP4-209ENST00000630622 POLA2Q14181 598 aa20.76■□□□□ 0.91
CDC42EP4-209ENST00000630622 TMC4Q7Z404 712 aa20.76■□□□□ 0.91
CDC42EP4-209ENST00000630622 SSH3Q8TE77 659 aa20.76■□□□□ 0.91
CDC42EP4-209ENST00000630622 SNED1Q8TER0 1413 aa20.76■□□□□ 0.91
CDC42EP4-209ENST00000630622 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 C21orf2O43822 256 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 IGHMBP2P38935 993 aaKnown RBP20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 PTPN12Q05209 780 aaKnown RBP20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 OLFM4Q6UX06 510 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 SIRT2Q8IXJ6 389 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 SP8Q8IXZ3 490 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 KLHDC4Q8TBB5 520 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 BSDC1Q9NW68 430 aaPredicted RBP20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 LTBP1Q14766 1721 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 FER1L6Q2WGJ9 1857 aa20.75■□□□□ 0.91
CDC42EP4-209ENST00000630622 AAMPQ13685 434 aa20.74■□□□□ 0.91
CDC42EP4-209ENST00000630622 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
CDC42EP4-209ENST00000630622 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
CDC42EP4-209ENST00000630622 TAF7LQ5H9L4 462 aa20.73■□□□□ 0.91
CDC42EP4-209ENST00000630622 MPHOSPH8Q99549 860 aa20.73■□□□□ 0.91
CDC42EP4-209ENST00000630622 COPRSQ9NQ92 184 aa20.73■□□□□ 0.91
CDC42EP4-209ENST00000630622 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
CDC42EP4-209ENST00000630622 PCDHB15Q9Y5E8 787 aa20.73■□□□□ 0.91
CDC42EP4-209ENST00000630622 CC2D2BQ6DHV5 1058 aa20.72■□□□□ 0.91
CDC42EP4-209ENST00000630622 LDHAL6AQ6ZMR3 332 aa20.72■□□□□ 0.91
CDC42EP4-209ENST00000630622 PUS3Q9BZE2 481 aaKnown RBP20.72■□□□□ 0.91
CDC42EP4-209ENST00000630622 LRRC24Q50LG9 513 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms