RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 MSH6P52701 1360 aa13.46□□□□□ -0.25
SHPRH-211ENST00000629427 STAT6P42226 847 aa13.46□□□□□ -0.25
SHPRH-211ENST00000629427 IKBKGQ9Y6K9 419 aa13.46□□□□□ -0.25
SHPRH-211ENST00000629427 UQCRFS1P1P0C7P4 283 aa13.46□□□□□ -0.25
SHPRH-211ENST00000629427 ERMNQ8TAM6 284 aa13.46□□□□□ -0.25
SHPRH-211ENST00000629427 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.26
SHPRH-211ENST00000629427 CADPS2Q86UW7 1296 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 FAM83GA6ND36 823 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 ARL1P40616 181 aaPredicted RBP13.45□□□□□ -0.26
SHPRH-211ENST00000629427 C20orf194Q5TEA3 1177 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 ANXA1P04083 346 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
SHPRH-211ENST00000629427 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
SHPRH-211ENST00000629427 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
SHPRH-211ENST00000629427 TRIM27P14373 513 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 KRT23Q9C075 422 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 LRRC45Q96CN5 670 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 FAM212AQ96EL1 285 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHPRH-211ENST00000629427 CALM1P0DP23 149 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 CALM2P0DP24 149 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 CALM3P0DP25 149 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 SSFA2P28290 1259 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 PPP1R14CQ8TAE6 165 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
SHPRH-211ENST00000629427 ABCC5O15440 1437 aa13.45□□□□□ -0.26
SHPRH-211ENST00000629427 CCDC175P0C221 793 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 AFMP43652 599 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 C16orf45Q96MC5 204 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-211ENST00000629427 NLRP3Q96P20 1036 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
SHPRH-211ENST00000629427 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
SHPRH-211ENST00000629427 CCDC102BQ68D86 513 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 IDI1Q13907 227 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 GSDMDP57764 484 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 NCBP1Q09161 790 aaKnown RBP13.44□□□□□ -0.26
SHPRH-211ENST00000629427 MAATS1Q7Z4T9 603 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 GIMAP7Q8NHV1 300 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
SHPRH-211ENST00000629427 HMG20BQ9P0W2 317 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 USP25Q9UHP3 1055 aa13.44□□□□□ -0.26
SHPRH-211ENST00000629427 ACEP12821 1306 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 LRSAM1Q6UWE0 723 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 ZBTB43O43298 467 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 NAA16Q6N069 864 aaPredicted RBP13.43□□□□□ -0.26
SHPRH-211ENST00000629427 RMND1Q9NWS8 449 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
SHPRH-211ENST00000629427 RTN1Q16799 776 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 ZSCAN30Q86W11 494 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 OTUD6BQ8N6M0 293 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 SYKP43405 635 aa13.43□□□□□ -0.26
SHPRH-211ENST00000629427 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 ESR2Q92731 530 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 KRT13P13646 458 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 KIAA0753Q2KHM9 967 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 USP37Q86T82 979 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 ALG1Q9BT22 464 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 NOS1P29475 1434 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 N4BP3O15049 544 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 SKAP1Q86WV1 359 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 NYXQ9GZU5 481 aa13.42□□□□□ -0.26
SHPRH-211ENST00000629427 TCHPQ9BT92 498 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 NAPAP54920 295 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 MICALCLQ6ZW33 695 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 MRVI1Q9Y6F6 885 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 TRAF1Q13077 416 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 PLVAPQ9BX97 442 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
SHPRH-211ENST00000629427 TICAM2Q86XR7 235 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 SREK1Q8WXA9 508 aaKnown RBP13.41□□□□□ -0.26
SHPRH-211ENST00000629427 CNNM2Q9H8M5 875 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 TOM1O60784 492 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
SHPRH-211ENST00000629427 CBX1P83916 185 aa13.41□□□□□ -0.26
SHPRH-211ENST00000629427 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
SHPRH-211ENST00000629427 ADCY5O95622 1261 aa13.4□□□□□ -0.26
SHPRH-211ENST00000629427 PAIP2Q9BPZ3 127 aaKnown RBP13.4□□□□□ -0.26
SHPRH-211ENST00000629427 ZSCAN16Q9H4T2 348 aaPredicted RBP13.4□□□□□ -0.26
SHPRH-211ENST00000629427 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.26
SHPRH-211ENST00000629427 RRAGBQ5VZM2 374 aa13.4□□□□□ -0.26
SHPRH-211ENST00000629427 XAGE3Q8WTP9 111 aa13.4□□□□□ -0.26
SHPRH-211ENST00000629427 SPDYE3A6NKU9 549 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms