RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 INPP5BP32019 993 aa7.01□□□□□ -1.29
VPS8-228ENST00000628962 GPLD1P80108 840 aa7.01□□□□□ -1.29
VPS8-228ENST00000628962 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
VPS8-228ENST00000628962 C11orf16Q9NQ32 467 aa7.01□□□□□ -1.29
VPS8-228ENST00000628962 RBM19Q9Y4C8 960 aaKnown RBP7.01□□□□□ -1.29
VPS8-228ENST00000628962 FSTP19883 344 aa7□□□□□ -1.29
VPS8-228ENST00000628962 TARSP26639 723 aaKnown RBP7□□□□□ -1.29
VPS8-228ENST00000628962 IDH3AP50213 366 aa7□□□□□ -1.29
VPS8-228ENST00000628962 AKTIPQ9H8T0 292 aa7□□□□□ -1.29
VPS8-228ENST00000628962 PAX4O43316 350 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 CD97P48960 835 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 SEC13P55735 322 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 MLLT1Q03111 559 aaPredicted RBP6.99□□□□□ -1.29
VPS8-228ENST00000628962 HDGFL1Q5TGJ6 251 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 KRT25Q7Z3Z0 450 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 TMEM130Q8N3G9 435 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 FMNL2Q96PY5 1086 aa6.99□□□□□ -1.29
VPS8-228ENST00000628962 SSTR4P31391 388 aa6.98□□□□□ -1.29
VPS8-228ENST00000628962 SMG9Q9H0W8 520 aaKnown RBP6.98□□□□□ -1.29
VPS8-228ENST00000628962 F8W735 103 aaPredicted RBP6.97□□□□□ -1.29
VPS8-228ENST00000628962 ALX3O95076 343 aa6.97□□□□□ -1.29
VPS8-228ENST00000628962 RARAP10276 462 aa6.97□□□□□ -1.29
VPS8-228ENST00000628962 NRLP54845 237 aa6.97□□□□□ -1.29
VPS8-228ENST00000628962 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
VPS8-228ENST00000628962 KLK14Q9P0G3 267 aa6.97□□□□□ -1.29
VPS8-228ENST00000628962 SASH3O75995 380 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 RASA1P20936 1047 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 IGFBP4P22692 258 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 TXKP42681 527 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 ARSDP51689 593 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 Q6ZS46 218 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 HFE2Q6ZVN8 426 aa6.96□□□□□ -1.3
VPS8-228ENST00000628962 RAD21O60216 631 aa6.95□□□□□ -1.3
VPS8-228ENST00000628962 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
VPS8-228ENST00000628962 MICAL2O94851 1124 aa6.94□□□□□ -1.3
VPS8-228ENST00000628962 MED26O95402 600 aa6.94□□□□□ -1.3
VPS8-228ENST00000628962 EIF2AK2P19525 551 aaKnown RBP6.94□□□□□ -1.3
VPS8-228ENST00000628962 DGKZQ13574 1117 aa6.94□□□□□ -1.3
VPS8-228ENST00000628962 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
VPS8-228ENST00000628962 QTRT2Q9H974 415 aaKnown RBP6.94□□□□□ -1.3
VPS8-228ENST00000628962 SRA1Q9HD15 236 aaKnown RBP6.94□□□□□ -1.3
VPS8-228ENST00000628962 TLR7Q9NYK1 1049 aaKnown RBP6.94□□□□□ -1.3
VPS8-228ENST00000628962 LGR5O75473 907 aa6.93□□□□□ -1.3
VPS8-228ENST00000628962 EGFRP00533 1210 aa6.93□□□□□ -1.3
VPS8-228ENST00000628962 ARID4AP29374 1257 aaPredicted RBP6.93□□□□□ -1.3
VPS8-228ENST00000628962 IRAK1P51617 712 aa6.93□□□□□ -1.3
VPS8-228ENST00000628962 PLD4Q96BZ4 506 aa6.93□□□□□ -1.3
VPS8-228ENST00000628962 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
VPS8-228ENST00000628962 OPLAHO14841 1288 aa6.92□□□□□ -1.3
VPS8-228ENST00000628962 GSC2O15499 205 aa6.92□□□□□ -1.3
VPS8-228ENST00000628962 SIK1P57059 783 aa6.92□□□□□ -1.3
VPS8-228ENST00000628962 SETDB1Q15047 1291 aa6.92□□□□□ -1.3
VPS8-228ENST00000628962 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
VPS8-228ENST00000628962 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
VPS8-228ENST00000628962 J3QW42 95 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 TGFB1P01137 390 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 HOXD8P13378 290 aaPredicted RBP6.91□□□□□ -1.3
VPS8-228ENST00000628962 DPYDQ12882 1025 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 PTK7Q13308 1070 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 TPRNQ4KMQ1 711 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 CRTC2Q53ET0 693 aaPredicted RBP6.91□□□□□ -1.3
VPS8-228ENST00000628962 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 AGGF1Q8N302 714 aaeCLIP6.91□□□□□ -1.3
VPS8-228ENST00000628962 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 MYO19Q96H55 970 aa6.91□□□□□ -1.3
VPS8-228ENST00000628962 RTCBQ9Y3I0 505 aaKnown RBP6.91□□□□□ -1.3
VPS8-228ENST00000628962 MAFBQ9Y5Q3 323 aaPredicted RBP6.91□□□□□ -1.3
VPS8-228ENST00000628962 PTCD1O75127 700 aaKnown RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 COBLO75128 1261 aa6.9□□□□□ -1.3
VPS8-228ENST00000628962 YBX3P16989 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS8-228ENST00000628962 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 GP2P55259 537 aaKnown RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 C11orf91Q3C1V1 193 aa6.9□□□□□ -1.3
VPS8-228ENST00000628962 GDF6Q6KF10 455 aaPredicted RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 DCAF11Q8TEB1 546 aa6.9□□□□□ -1.3
VPS8-228ENST00000628962 UBL7Q96S82 380 aaPredicted RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 TFIP11Q9UBB9 837 aaKnown RBP6.9□□□□□ -1.3
VPS8-228ENST00000628962 USP20Q9Y2K6 914 aa6.9□□□□□ -1.3
VPS8-228ENST00000628962 GLB1P16278 677 aa6.89□□□□□ -1.31
VPS8-228ENST00000628962 UBTFP17480 764 aaKnown RBP6.89□□□□□ -1.31
VPS8-228ENST00000628962 FOXO3O43524 673 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 MMP20O60882 483 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 XYLBO75191 536 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 GHRHP01286 108 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 PSAPP07602 524 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 WEE1P30291 646 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 SOX18P35713 384 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 ZDHHC13Q8IUH4 622 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 ARMC10Q8N2F6 343 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 STOML1Q9UBI4 398 aa6.88□□□□□ -1.31
VPS8-228ENST00000628962 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
VPS8-228ENST00000628962 ADAMTS4O75173 837 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 SPINK2P20155 84 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 KANK4Q5T7N3 995 aaPredicted RBP6.87□□□□□ -1.31
VPS8-228ENST00000628962 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 CACTIN-AS1Q8N1I8 211 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 NSUN5Q96P11 429 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms