RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 GCKRQ14397 625 aa10.04□□□□□ -0.8
CCDC163-204ENST00000628293 SF3B3Q15393 1217 aaKnown RBP10.04□□□□□ -0.8
CCDC163-204ENST00000628293 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
CCDC163-204ENST00000628293 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
CCDC163-204ENST00000628293 NLRP3Q96P20 1036 aa10.04□□□□□ -0.8
CCDC163-204ENST00000628293 CRAMP1Q96RY5 1269 aa10.04□□□□□ -0.8
CCDC163-204ENST00000628293 PTPRCP08575 1304 aa10.04□□□□□ -0.8
CCDC163-204ENST00000628293 COL4A5P29400 1685 aa10.03□□□□□ -0.8
CCDC163-204ENST00000628293 H7C1W4 665 aa10.03□□□□□ -0.8
CCDC163-204ENST00000628293 DSG3P32926 999 aa10.03□□□□□ -0.8
CCDC163-204ENST00000628293 NEXNQ0ZGT2 675 aa10.03□□□□□ -0.8
CCDC163-204ENST00000628293 ARHGAP27Q6ZUM4 889 aa10.03□□□□□ -0.8
CCDC163-204ENST00000628293 RPGRQ92834 1020 aaKnown RBP10.03□□□□□ -0.8
CCDC163-204ENST00000628293 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
CCDC163-204ENST00000628293 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
CCDC163-204ENST00000628293 UBE3BQ7Z3V4 1068 aa10.02□□□□□ -0.81
CCDC163-204ENST00000628293 ZNF219Q9P2Y4 722 aaPredicted RBP10.02□□□□□ -0.81
CCDC163-204ENST00000628293 LTBP3Q9NS15 1303 aa10.02□□□□□ -0.81
CCDC163-204ENST00000628293 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
CCDC163-204ENST00000628293 PDE8AO60658 829 aa10.01□□□□□ -0.81
CCDC163-204ENST00000628293 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
CCDC163-204ENST00000628293 RBM17Q96I25 401 aaKnown RBP10.01□□□□□ -0.81
CCDC163-204ENST00000628293 PLA2G12BQ9BX93 195 aa10.01□□□□□ -0.81
CCDC163-204ENST00000628293 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
CCDC163-204ENST00000628293 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
CCDC163-204ENST00000628293 BCAR3O75815 825 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 ALDH1L1O75891 902 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 CTSWP56202 376 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 GRAPQ13588 217 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 CCDC93Q567U6 631 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 GRAPLQ8TC17 118 aaPredicted RBP10□□□□□ -0.81
CCDC163-204ENST00000628293 SEC31BQ9NQW1 1179 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 NOB1Q9ULX3 412 aaKnown RBP10□□□□□ -0.81
CCDC163-204ENST00000628293 TNNQ9UQP3 1299 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 UTYO14607 1347 aa10□□□□□ -0.81
CCDC163-204ENST00000628293 PSME4Q14997 1843 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 GRM8O00222 908 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 SOGA3Q5TF21 947 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 SLC4A10Q6U841 1118 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 DDX46Q7L014 1031 aaKnown RBP9.99□□□□□ -0.81
CCDC163-204ENST00000628293 ZNF784Q8NCA9 323 aaPredicted RBP9.99□□□□□ -0.81
CCDC163-204ENST00000628293 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 KAZALD1Q96I82 304 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 TAOK3Q9H2K8 898 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 ATP6V0A2Q9Y487 856 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 KIF16BQ96L93 1317 aa9.99□□□□□ -0.81
CCDC163-204ENST00000628293 SCN9AQ15858 1988 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 CSF1RP07333 972 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 NBPF7P0C2Y1 421 aaPredicted RBP9.98□□□□□ -0.81
CCDC163-204ENST00000628293 LMNB1P20700 586 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 FOXO4P98177 505 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC163-204ENST00000628293 CCDC85AQ96PX6 553 aaPredicted RBP9.98□□□□□ -0.81
CCDC163-204ENST00000628293 GREM2Q9H772 168 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 RNF181Q9P0P0 153 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 WDR90Q96KV7 1748 aa9.98□□□□□ -0.81
CCDC163-204ENST00000628293 BBOX1O75936 387 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 TRIM27P14373 513 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 HSP90B1P14625 803 aaKnown RBP9.97□□□□□ -0.81
CCDC163-204ENST00000628293 FAM161AQ3B820 660 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 SP8Q8IXZ3 490 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 ARHGAP45Q92619 1136 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 PSMD1Q99460 953 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 API5Q9BZZ5 524 aaKnown RBP9.97□□□□□ -0.81
CCDC163-204ENST00000628293 USP44Q9H0E7 712 aa9.97□□□□□ -0.81
CCDC163-204ENST00000628293 C1QTNF8P60827 252 aa9.96□□□□□ -0.82
CCDC163-204ENST00000628293 RPS8P62241 208 aaKnown RBP9.96□□□□□ -0.82
CCDC163-204ENST00000628293 TMC4Q7Z404 712 aa9.96□□□□□ -0.82
CCDC163-204ENST00000628293 RTKN2Q8IZC4 609 aa9.96□□□□□ -0.82
CCDC163-204ENST00000628293 RTFDC1Q9BY42 306 aaPredicted RBP9.96□□□□□ -0.82
CCDC163-204ENST00000628293 ZNF277Q9NRM2 450 aaPredicted RBP9.96□□□□□ -0.82
CCDC163-204ENST00000628293 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
CCDC163-204ENST00000628293 IARSP41252 1262 aaKnown RBP9.95□□□□□ -0.82
CCDC163-204ENST00000628293 INTS3Q68E01 1043 aaKnown RBP9.95□□□□□ -0.82
CCDC163-204ENST00000628293 ATF7IPQ6VMQ6 1270 aa9.95□□□□□ -0.82
CCDC163-204ENST00000628293 ANKRD44Q8N8A2 993 aa9.95□□□□□ -0.82
CCDC163-204ENST00000628293 C9orf78Q9NZ63 289 aaPredicted RBP9.95□□□□□ -0.82
CCDC163-204ENST00000628293 SCN4AP35499 1836 aa9.95□□□□□ -0.82
CCDC163-204ENST00000628293 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
CCDC163-204ENST00000628293 ITGA6P23229 1130 aa9.94□□□□□ -0.82
CCDC163-204ENST00000628293 CCT4P50991 539 aaKnown RBP9.94□□□□□ -0.82
CCDC163-204ENST00000628293 GPSM2P81274 684 aa9.94□□□□□ -0.82
CCDC163-204ENST00000628293 RABL6Q3YEC7 729 aaPredicted RBP9.94□□□□□ -0.82
CCDC163-204ENST00000628293 GRIPAP1Q4V328 841 aa9.94□□□□□ -0.82
CCDC163-204ENST00000628293 LMBR1LQ6UX01 489 aa9.94□□□□□ -0.82
CCDC163-204ENST00000628293 BICC1Q9H694 974 aaKnown RBP9.94□□□□□ -0.82
CCDC163-204ENST00000628293 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
CCDC163-204ENST00000628293 ZNF541Q9H0D2 1346 aa9.93□□□□□ -0.82
CCDC163-204ENST00000628293 RLBP1P12271 317 aa9.93□□□□□ -0.82
CCDC163-204ENST00000628293 ZKSCAN2Q63HK3 967 aa9.93□□□□□ -0.82
CCDC163-204ENST00000628293 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
CCDC163-204ENST00000628293 MPNDQ8N594 471 aa9.93□□□□□ -0.82
CCDC163-204ENST00000628293 FRAT1Q92837 279 aaPredicted RBP9.93□□□□□ -0.82
CCDC163-204ENST00000628293 CDC5LQ99459 802 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms