RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
TCF4-258ENST00000627320 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
TCF4-258ENST00000627320 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
TCF4-258ENST00000627320 CLEC4GQ6UXB4 293 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 NPM2Q86SE8 214 aaKnown RBP11.53□□□□□ -0.56
TCF4-258ENST00000627320 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
TCF4-258ENST00000627320 TEX13AQ9BXU3 409 aaPredicted RBP11.53□□□□□ -0.56
TCF4-258ENST00000627320 KCNQ5Q9NR82 932 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 MIS18AQ9NYP9 233 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 ZSWIM8A7E2V4 1837 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 PSME4Q14997 1843 aa11.53□□□□□ -0.56
TCF4-258ENST00000627320 U2SURPO15042 1029 aaKnown RBP11.52□□□□□ -0.57
TCF4-258ENST00000627320 HSPA5P11021 654 aaKnown RBP11.52□□□□□ -0.57
TCF4-258ENST00000627320 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.57
TCF4-258ENST00000627320 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
TCF4-258ENST00000627320 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
TCF4-258ENST00000627320 CDC37L1Q7L3B6 337 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 R3HDMLQ9H3Y0 253 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.57
TCF4-258ENST00000627320 CNOT7Q9UIV1 285 aaKnown RBP11.52□□□□□ -0.57
TCF4-258ENST00000627320 ZNRF3Q9ULT6 936 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 ABCC4O15439 1325 aa11.52□□□□□ -0.57
TCF4-258ENST00000627320 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
TCF4-258ENST00000627320 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
TCF4-258ENST00000627320 NTSR2O95665 410 aa11.51□□□□□ -0.57
TCF4-258ENST00000627320 SLC10A3P09131 477 aa11.51□□□□□ -0.57
TCF4-258ENST00000627320 HOXA10P31260 410 aaPredicted RBP11.51□□□□□ -0.57
TCF4-258ENST00000627320 RASAL3Q86YV0 1011 aa11.51□□□□□ -0.57
TCF4-258ENST00000627320 ZNF296Q8WUU4 475 aaPredicted RBP11.51□□□□□ -0.57
TCF4-258ENST00000627320 TRIOBPQ9H2D6 2365 aa11.51□□□□□ -0.57
TCF4-258ENST00000627320 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
TCF4-258ENST00000627320 MKRN3Q13064 507 aaKnown RBP11.5□□□□□ -0.57
TCF4-258ENST00000627320 CC2D1BQ5T0F9 858 aaKnown RBP11.5□□□□□ -0.57
TCF4-258ENST00000627320 SAGE1Q9NXZ1 904 aa11.5□□□□□ -0.57
TCF4-258ENST00000627320 KIAA0100Q14667 2235 aaKnown RBP11.5□□□□□ -0.57
TCF4-258ENST00000627320 CEP290O15078 2479 aa11.49□□□□□ -0.57
TCF4-258ENST00000627320 MYL6BP14649 208 aa11.49□□□□□ -0.57
TCF4-258ENST00000627320 KRT26Q7Z3Y9 468 aa11.49□□□□□ -0.57
TCF4-258ENST00000627320 DBNDD1Q9H9R9 158 aa11.49□□□□□ -0.57
TCF4-258ENST00000627320 PSMD14O00487 310 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
TCF4-258ENST00000627320 PRKAR2BP31323 418 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 PRAMEF18Q5VWM3 479 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
TCF4-258ENST00000627320 CRAMP1Q96RY5 1269 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 THUMPD2Q9BTF0 503 aaKnown RBP11.48□□□□□ -0.57
TCF4-258ENST00000627320 ATP6V0A2Q9Y487 856 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 KIF7Q2M1P5 1343 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
TCF4-258ENST00000627320 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
TCF4-258ENST00000627320 KIAA2012Q0VF49 1180 aa11.47□□□□□ -0.57
TCF4-258ENST00000627320 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
TCF4-258ENST00000627320 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
TCF4-258ENST00000627320 CDCA5Q96FF9 252 aa11.47□□□□□ -0.57
TCF4-258ENST00000627320 GGA3Q9NZ52 723 aa11.47□□□□□ -0.57
TCF4-258ENST00000627320 RRP7AQ9Y3A4 280 aaKnown RBP11.47□□□□□ -0.57
TCF4-258ENST00000627320 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
TCF4-258ENST00000627320 ANXA1P04083 346 aa11.46□□□□□ -0.57
TCF4-258ENST00000627320 DPP8Q6V1X1 898 aaPredicted RBP11.46□□□□□ -0.57
TCF4-258ENST00000627320 C2orf69Q8N8R5 385 aa11.46□□□□□ -0.57
TCF4-258ENST00000627320 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
TCF4-258ENST00000627320 RTFDC1Q9BY42 306 aaPredicted RBP11.46□□□□□ -0.57
TCF4-258ENST00000627320 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.57
TCF4-258ENST00000627320 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
TCF4-258ENST00000627320 CAP1Q01518 475 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 MPNDQ8N594 471 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 RSPH6AQ9H0K4 717 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 HDAC9Q9UKV0 1011 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
TCF4-258ENST00000627320 LAMB1P07942 1786 aa11.45□□□□□ -0.58
TCF4-258ENST00000627320 IBTKQ9P2D0 1353 aaPredicted RBP11.44□□□□□ -0.58
TCF4-258ENST00000627320 CDHR2Q9BYE9 1310 aa11.44□□□□□ -0.58
TCF4-258ENST00000627320 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
TCF4-258ENST00000627320 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
TCF4-258ENST00000627320 FZD1Q9UP38 647 aa11.44□□□□□ -0.58
TCF4-258ENST00000627320 UBE2Q2LH0YL09 131 aa11.43□□□□□ -0.58
TCF4-258ENST00000627320 H7C1D1 291 aa11.43□□□□□ -0.58
TCF4-258ENST00000627320 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
TCF4-258ENST00000627320 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
TCF4-258ENST00000627320 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.43□□□□□ -0.58
TCF4-258ENST00000627320 OTOFQ9HC10 1997 aa11.43□□□□□ -0.58
TCF4-258ENST00000627320 GPR25O00155 361 aa11.42□□□□□ -0.58
TCF4-258ENST00000627320 EN2P19622 333 aaPredicted RBP11.42□□□□□ -0.58
TCF4-258ENST00000627320 TNIP1Q15025 636 aa11.42□□□□□ -0.58
TCF4-258ENST00000627320 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
TCF4-258ENST00000627320 FBXO46Q6PJ61 603 aaPredicted RBP11.42□□□□□ -0.58
TCF4-258ENST00000627320 DCPSQ96C86 337 aaKnown RBP11.42□□□□□ -0.58
TCF4-258ENST00000627320 COL6A3P12111 3177 aa11.41□□□□□ -0.58
TCF4-258ENST00000627320 ECE2O60344 883 aa11.41□□□□□ -0.58
TCF4-258ENST00000627320 SP8Q8IXZ3 490 aa11.41□□□□□ -0.58
TCF4-258ENST00000627320 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
TCF4-258ENST00000627320 POLLQ9UGP5 575 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms