RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 MYH7P12883 1935 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 MAP4K4O95819 1239 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 VPS72Q15906 364 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 MAP4K1Q92918 833 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 WDR33Q9C0J8 1336 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 ITGB4P16144 1822 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 HIP1O00291 1037 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 NWD2Q9ULI1 1742 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 ST3GAL1Q11201 340 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 CLASRPQ8N2M8 674 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 NSFL1CQ9UNZ2 370 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 LRP5O75197 1615 aa8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 COL22A1Q8NFW1 1626 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-244ENST00000627109 ESPNB1AK53 854 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 GCKRQ14397 625 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 KRT27Q7Z3Y8 459 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 RUFY2Q8WXA3 655 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 DCAF5Q96JK2 942 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 LIMCH1Q9UPQ0 1083 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 COL5A2P05997 1499 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 CCDC171Q6TFL3 1326 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 PRPF40AO75400 957 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 RBSNQ9H1K0 784 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 PTCD1O75127 700 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 ANXA1P04083 346 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 AK2P54819 239 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 CWF19L2Q2TBE0 894 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 TMCO4Q5TGY1 634 aa8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 EAF2Q96CJ1 260 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-244ENST00000627109 TRIM37O94972 964 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 PTH1RQ03431 593 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 GPATCH3Q96I76 525 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 RGS17Q9UGC6 210 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 SPATA31A1Q5TZJ5 1347 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 MYH3P11055 1940 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 CABP4P57796 275 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 FGD1P98174 961 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 IFNL2Q8IZJ0 200 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 ZSCAN31Q96LW9 406 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 SPATA31A5Q5VU36 1347 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 SPATA31A7Q8IWB4 1347 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 PALLDQ8WX93 1383 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 CYP27B1O15528 508 aa8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-244ENST00000627109 LAMB2P55268 1798 aa8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 ZSCAN22P10073 491 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 ATP5JP18859 108 aa8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 SNRPA1P09661 255 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 KCNJ4P48050 445 aa8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 PA2G4Q9UQ80 394 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
CTNNA1-244ENST00000627109 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 FUCA2Q9BTY2 467 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 GPR108Q9NPR9 543 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 ZNF500O60304 480 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 KDM4AO75164 1064 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 TERF1P54274 439 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 KCNQ4P56696 695 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 PTPN12Q05209 780 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 ADCK5Q3MIX3 580 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 ZNF496Q96IT1 587 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 NOL7Q9UMY1 257 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 ZNF609O15014 1411 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 KCNQ2O43526 872 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 LARGE1O95461 756 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 MSNP26038 577 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 CWC27Q6UX04 472 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 RNF214Q8ND24 703 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
CTNNA1-244ENST00000627109 C4AP0C0L4 1744 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 F13A1P00488 732 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 SYT1P21579 422 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 MCM5P33992 734 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 CREB3L3Q68CJ9 461 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 ZSCAN30Q86W11 494 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 CDCA7Q9BWT1 371 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 TMOD3Q9NYL9 352 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 AKAP11Q9UKA4 1901 aa8.57□□□□□ -1.04
CTNNA1-244ENST00000627109 ZNF831Q5JPB2 1677 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms