RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	LRP10	Q7Z4F1	713 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	SLC51A	Q86UW1	340 aa		10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	THUMPD2	Q9BTF0	503 aa	Known RBP	10.42	□□□□□ -0.74
TCF4-256	ENST00000626631	MYL6B	P14649	208 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	SCNN1D	P51172	638 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	EIF6	P56537	245 aa	Known RBP	10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	PDIA6	Q15084	440 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	SLC10A5	Q5PT55	438 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	KIF6	Q6ZMV9	814 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	RPGR	Q92834	1020 aa	Known RBP	10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	RBM17	Q96I25	401 aa	Known RBP	10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	ZBTB3	Q9H5J0	574 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	KDM3B	Q7LBC6	1761 aa		10.41	□□□□□ -0.74
TCF4-256	ENST00000626631	ERBB4	Q15303	1308 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	LAMB4	A4D0S4	1761 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	EPS15	P42566	896 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	LARGE2	Q8N3Y3	721 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	VPS33B	Q9H267	617 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	GJA3	Q9Y6H8	435 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	DLG5	Q8TDM6	1919 aa		10.4	□□□□□ -0.74
TCF4-256	ENST00000626631	WDR33	Q9C0J8	1336 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	LTBP1	Q14766	1721 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	PPEF1	O14829	653 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	NEFM	P07197	916 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	LBX1	P52954	281 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	FMR1	Q06787	632 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	PARP10	Q53GL7	1025 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	CST9	Q5W186	159 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	USP50	Q70EL3	339 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	PPP1R42	Q7Z4L9	355 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	AIDA	Q96BJ3	306 aa		10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-256	ENST00000626631	TCERG1	O14776	1098 aa	Known RBP	10.38	□□□□□ -0.75
TCF4-256	ENST00000626631	HSPA8	P11142	646 aa	Known RBP	10.38	□□□□□ -0.75
TCF4-256	ENST00000626631	MAP2K1	Q02750	393 aa	Predicted RBP	10.38	□□□□□ -0.75
TCF4-256	ENST00000626631	NLRP3	Q96P20	1036 aa		10.38	□□□□□ -0.75
TCF4-256	ENST00000626631	PNN	Q9H307	717 aa	Known RBP	10.38	□□□□□ -0.75
TCF4-256	ENST00000626631	ATP6V0A2	Q9Y487	856 aa		10.38	□□□□□ -0.75
TCF4-256	ENST00000626631	TTLL13P	A6NNM8	815 aa		10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	MAP3K13	O43283	966 aa		10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	LMOD1	P29536	600 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	PROSER3	Q2NL68	480 aa		10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	UTP14A	Q9BVJ6	771 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	BABAM1	Q9NWV8	329 aa		10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	PGAP2	Q9UHJ9	254 aa		10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	TSPYL4	Q9UJ04	414 aa		10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	ABT1	Q9ULW3	272 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-256	ENST00000626631	ABCC4	O15439	1325 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	TRAF5	O00463	557 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	PPIP5K2	O43314	1243 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	BBOX1	O75936	387 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	EIF2S2	P20042	333 aa	Known RBP	10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	CXCL9	Q07325	125 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	AOC3	Q16853	763 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	SP8	Q8IXZ3	490 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	NIM1K	Q8IY84	436 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	ADARB2	Q9NS39	739 aa	Known RBP	10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	GPRC5D	Q9NZD1	345 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	ZNRF3	Q9ULT6	936 aa		10.36	□□□□□ -0.75
TCF4-256	ENST00000626631	ANXA1	P04083	346 aa		10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	RIPK4	P57078	832 aa		10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	COPS6	Q7L5N1	327 aa		10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	NLRP10	Q86W26	655 aa		10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	CAPNS2	Q96L46	248 aa		10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	GPR101	Q96P66	508 aa	Predicted RBP	10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	TLL2	Q9Y6L7	1015 aa		10.35	□□□□□ -0.75
TCF4-256	ENST00000626631	MAPK8IP3	Q9UPT6	1336 aa		10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	HCLS1	P14317	486 aa	Predicted RBP	10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	TMPO	P42166	694 aa	Known RBP	10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	GMPS	P49915	693 aa	Predicted RBP	10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	HIRA	P54198	1017 aa	Predicted RBP	10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	KIAA2012	Q0VF49	1180 aa		10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	TCIRG1	Q13488	830 aa		10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	IER5L	Q5T953	404 aa		10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	CYP4F22	Q6NT55	531 aa		10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	SUPT20H	Q8NEM7	779 aa		10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	TMX4	Q9H1E5	349 aa	Predicted RBP	10.34	□□□□□ -0.75
TCF4-256	ENST00000626631	CHL1	O00533	1208 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	MAP2K2	P36507	400 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	ECE1	P42892	770 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	HSP90AB3P	Q58FF7	597 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	DPP8	Q6V1X1	898 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	SAPCD2	Q86UD0	394 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	MPND	Q8N594	471 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	XAGE3	Q8WTP9	111 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	ZC3H15	Q8WU90	426 aa	Known RBP	10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	ABHD8	Q96I13	439 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	TNRC18	O15417	2968 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	THSD7B	Q9C0I4	1608 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	CDHR2	Q9BYE9	1310 aa		10.33	□□□□□ -0.76
TCF4-256	ENST00000626631	YDJC	A8MPS7	323 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	AOC2	O75106	756 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	AIMP1	Q12904	312 aa	Known RBP	10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	GRAP	Q13588	217 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	CIAPIN1	Q6FI81	312 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	DDX46	Q7L014	1031 aa	Known RBP	10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	GRAPL	Q8TC17	118 aa	Predicted RBP	10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	HHIPL1	Q96JK4	782 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	TRMT112	Q9UI30	125 aa	Known RBP	10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms