RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 CNPY2Q9Y2B0 182 aa11.98□□□□□ -0.49
TCF4-254ENST00000626584 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
TCF4-254ENST00000626584 MSNP26038 577 aaKnown RBP11.97□□□□□ -0.49
TCF4-254ENST00000626584 ME3Q16798 604 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 NAP1L5Q96NT1 182 aaPredicted RBP11.97□□□□□ -0.49
TCF4-254ENST00000626584 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 CCDC39Q9UFE4 941 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 TJP1Q07157 1748 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 OFD1O75665 1012 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 KCNJ4P48050 445 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 SIL1Q9H173 461 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 TPCN1Q9ULQ1 816 aa11.97□□□□□ -0.49
TCF4-254ENST00000626584 TAF5LO75529 589 aa11.96□□□□□ -0.49
TCF4-254ENST00000626584 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
TCF4-254ENST00000626584 TERF1P54274 439 aa11.96□□□□□ -0.49
TCF4-254ENST00000626584 KRT32Q14532 448 aa11.96□□□□□ -0.49
TCF4-254ENST00000626584 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
TCF4-254ENST00000626584 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
TCF4-254ENST00000626584 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
TCF4-254ENST00000626584 ZKSCAN5Q9Y2L8 839 aa11.96□□□□□ -0.49
TCF4-254ENST00000626584 H7C1W4 665 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 PDCP20941 246 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 CABP4P57796 275 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 TFCP2Q12800 502 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
TCF4-254ENST00000626584 KLHDC4Q8TBB5 520 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 HAUS7Q99871 368 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
TCF4-254ENST00000626584 GPR108Q9NPR9 543 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
TCF4-254ENST00000626584 TPM2P07951 284 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 TOB2Q14106 344 aaPredicted RBP11.94□□□□□ -0.5
TCF4-254ENST00000626584 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
TCF4-254ENST00000626584 ELP1O95163 1332 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 PALLDQ8WX93 1383 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 XIRP1Q702N8 1843 aaKnown RBP11.94□□□□□ -0.5
TCF4-254ENST00000626584 A0A087WZG4 1122 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 ZNF609O15014 1411 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 FOXO4P98177 505 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 FOXD4L6Q3SYB3 417 aaPredicted RBP11.94□□□□□ -0.5
TCF4-254ENST00000626584 FOXD4L3Q6VB84 417 aaPredicted RBP11.94□□□□□ -0.5
TCF4-254ENST00000626584 UBE3BQ7Z3V4 1068 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 FUCA2Q9BTY2 467 aa11.94□□□□□ -0.5
TCF4-254ENST00000626584 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
TCF4-254ENST00000626584 ERVV-2B6SEH9 535 aa11.93□□□□□ -0.5
TCF4-254ENST00000626584 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
TCF4-254ENST00000626584 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
TCF4-254ENST00000626584 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
TCF4-254ENST00000626584 DDX17Q92841 729 aaKnown RBP11.93□□□□□ -0.5
TCF4-254ENST00000626584 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
TCF4-254ENST00000626584 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
TCF4-254ENST00000626584 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
TCF4-254ENST00000626584 SHANK3Q9BYB0 1731 aa11.93□□□□□ -0.5
TCF4-254ENST00000626584 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
TCF4-254ENST00000626584 FIBPO43427 364 aa11.92□□□□□ -0.5
TCF4-254ENST00000626584 GLIPR1L2Q4G1C9 344 aa11.92□□□□□ -0.5
TCF4-254ENST00000626584 LARP1BQ659C4 914 aaKnown RBP11.92□□□□□ -0.5
TCF4-254ENST00000626584 NECAB1Q8N987 351 aa11.92□□□□□ -0.5
TCF4-254ENST00000626584 RNF214Q8ND24 703 aa11.92□□□□□ -0.5
TCF4-254ENST00000626584 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 KRT85P78386 507 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 ATG3Q9NT62 314 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 WDR17Q8IZU2 1322 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 LAMA4Q16363 1823 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 LMBR1LQ6UX01 489 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 ATG9AQ7Z3C6 839 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 DDX54Q8TDD1 881 aaKnown RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 EDC3Q96F86 508 aaKnown RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 HELLSQ9NRZ9 838 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
TCF4-254ENST00000626584 TAF6LQ9Y6J9 622 aa11.91□□□□□ -0.5
TCF4-254ENST00000626584 CIAO1O76071 339 aa11.9□□□□□ -0.5
TCF4-254ENST00000626584 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
TCF4-254ENST00000626584 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
TCF4-254ENST00000626584 CCDC191Q8NCU4 936 aa11.9□□□□□ -0.5
TCF4-254ENST00000626584 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
TCF4-254ENST00000626584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
TCF4-254ENST00000626584 JARID2Q92833 1246 aaPredicted RBP11.9□□□□□ -0.5
TCF4-254ENST00000626584 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
TCF4-254ENST00000626584 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
TCF4-254ENST00000626584 TTC6Q86TZ1 520 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms