RNA–Protein interactions for RNA: ENST00000624534.1

SMIM11B-206, Transcript of small integral membrane protein 11B, humanhuman

TSL 4

Gene SMIM11B, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-206ENST00000624534 CTSWP56202 376 aa19.5■□□□□ 0.71
SMIM11B-206ENST00000624534 C3orf67Q6ZVT6 689 aa19.5■□□□□ 0.71
SMIM11B-206ENST00000624534 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
SMIM11B-206ENST00000624534 USP44Q9H0E7 712 aa19.5■□□□□ 0.71
SMIM11B-206ENST00000624534 TAF1P21675 1872 aa19.49■□□□□ 0.71
SMIM11B-206ENST00000624534 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
SMIM11B-206ENST00000624534 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
SMIM11B-206ENST00000624534 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
SMIM11B-206ENST00000624534 PRPF40BQ6NWY9 871 aaKnown RBP19.48■□□□□ 0.71
SMIM11B-206ENST00000624534 BBOX1O75936 387 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 GNAI3P08754 354 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 GRAPQ13588 217 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 TMC4Q7Z404 712 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 TMEM57Q8N5G2 664 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 TTLL11Q8NHH1 800 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 GRAPLQ8TC17 118 aaPredicted RBP19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 TNNQ9UQP3 1299 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 CHD4Q14839 1912 aa19.47■□□□□ 0.71
SMIM11B-206ENST00000624534 CSF1RP07333 972 aa19.46■□□□□ 0.71
SMIM11B-206ENST00000624534 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMIM11B-206ENST00000624534 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
SMIM11B-206ENST00000624534 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
SMIM11B-206ENST00000624534 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
SMIM11B-206ENST00000624534 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
SMIM11B-206ENST00000624534 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
SMIM11B-206ENST00000624534 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
SMIM11B-206ENST00000624534 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
SMIM11B-206ENST00000624534 CDC5LQ99459 802 aaKnown RBP19.45■□□□□ 0.7
SMIM11B-206ENST00000624534 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
SMIM11B-206ENST00000624534 RLBP1P12271 317 aa19.44■□□□□ 0.7
SMIM11B-206ENST00000624534 FOXO4P98177 505 aa19.44■□□□□ 0.7
SMIM11B-206ENST00000624534 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
SMIM11B-206ENST00000624534 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
SMIM11B-206ENST00000624534 PLIN1O60240 522 aa19.43■□□□□ 0.7
SMIM11B-206ENST00000624534 MEIS3Q99687 375 aa19.43■□□□□ 0.7
SMIM11B-206ENST00000624534 GREM2Q9H772 168 aa19.43■□□□□ 0.7
SMIM11B-206ENST00000624534 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
SMIM11B-206ENST00000624534 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 C21orf2O43822 256 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 ANKRD18AQ8IVF6 992 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 PANK1Q8TE04 598 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 KAZALD1Q96I82 304 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 BICC1Q9H694 974 aaKnown RBP19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
SMIM11B-206ENST00000624534 ANKRD18BA2A2Z9 1011 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 ITGA6P23229 1130 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 IFIT5Q13325 482 aaKnown RBP19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 CCDC57Q2TAC2 916 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 FAM161AQ3B820 660 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 EPHA10Q5JZY3 1008 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 SP8Q8IXZ3 490 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 CELF1Q92879 486 aaKnown RBP19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 DDX19BQ9UMR2 479 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 ATP6V0A2Q9Y487 856 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 SBF1O95248 1867 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 CCDC88AQ3V6T2 1871 aa19.41■□□□□ 0.7
SMIM11B-206ENST00000624534 GNAI2P04899 355 aa19.4■□□□□ 0.7
SMIM11B-206ENST00000624534 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
SMIM11B-206ENST00000624534 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
SMIM11B-206ENST00000624534 ARHGAP27Q6ZUM4 889 aa19.39■□□□□ 0.69
SMIM11B-206ENST00000624534 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
SMIM11B-206ENST00000624534 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
SMIM11B-206ENST00000624534 GOLGB1Q14789 3259 aaKnown RBP19.39■□□□□ 0.69
SMIM11B-206ENST00000624534 ZBTB7BO15156 539 aaPredicted RBP19.38■□□□□ 0.69
SMIM11B-206ENST00000624534 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
SMIM11B-206ENST00000624534 LTBP3Q9NS15 1303 aa19.38■□□□□ 0.69
SMIM11B-206ENST00000624534 DICER1Q9UPY3 1922 aaKnown RBP19.37■□□□□ 0.69
SMIM11B-206ENST00000624534 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
SMIM11B-206ENST00000624534 MPHOSPH8Q99549 860 aa19.37■□□□□ 0.69
SMIM11B-206ENST00000624534 BSDC1Q9NW68 430 aaPredicted RBP19.37■□□□□ 0.69
SMIM11B-206ENST00000624534 COG6Q9Y2V7 657 aa19.37■□□□□ 0.69
SMIM11B-206ENST00000624534 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
SMIM11B-206ENST00000624534 COL4A1P02462 1669 aa19.36■□□□□ 0.69
SMIM11B-206ENST00000624534 SNED1Q8TER0 1413 aa19.35■□□□□ 0.69
SMIM11B-206ENST00000624534 MTX1Q13505 466 aa19.35■□□□□ 0.69
SMIM11B-206ENST00000624534 PSMD1Q99460 953 aa19.35■□□□□ 0.69
SMIM11B-206ENST00000624534 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMIM11B-206ENST00000624534 C20orf194Q5TEA3 1177 aa19.34■□□□□ 0.69
SMIM11B-206ENST00000624534 MPNDQ8N594 471 aa19.34■□□□□ 0.69
SMIM11B-206ENST00000624534 SUPT20HQ8NEM7 779 aa19.34■□□□□ 0.69
SMIM11B-206ENST00000624534 LTBP1Q14766 1721 aa19.34■□□□□ 0.69
SMIM11B-206ENST00000624534 NFKBIEO00221 500 aa19.33■□□□□ 0.68
SMIM11B-206ENST00000624534 DPP8Q6V1X1 898 aaPredicted RBP19.33■□□□□ 0.68
SMIM11B-206ENST00000624534 A0A1B0GUL6 1792 aa19.33■□□□□ 0.68
SMIM11B-206ENST00000624534 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
SMIM11B-206ENST00000624534 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
SMIM11B-206ENST00000624534 ANKRD2Q9GZV1 360 aa19.32■□□□□ 0.68
SMIM11B-206ENST00000624534 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
SMIM11B-206ENST00000624534 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
SMIM11B-206ENST00000624534 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms