RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
ATRX-211ENST00000623321 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
ATRX-211ENST00000623321 CSF1RP07333 972 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 RFC4P35249 363 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 PTPN12Q05209 780 aaKnown RBP18.44■□□□□ 0.54
ATRX-211ENST00000623321 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
ATRX-211ENST00000623321 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
ATRX-211ENST00000623321 PHF14O94880 888 aa18.43■□□□□ 0.54
ATRX-211ENST00000623321 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
ATRX-211ENST00000623321 OTUD7AQ8TE49 926 aaPredicted RBP18.43■□□□□ 0.54
ATRX-211ENST00000623321 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
ATRX-211ENST00000623321 PDE8AO60658 829 aa18.42■□□□□ 0.54
ATRX-211ENST00000623321 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
ATRX-211ENST00000623321 SIL1Q9H173 461 aa18.42■□□□□ 0.54
ATRX-211ENST00000623321 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
ATRX-211ENST00000623321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 NTSR2O95665 410 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 HSP90B1P14625 803 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 SSFA2P28290 1259 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 SASH1O94885 1247 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 PTMSP20962 102 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 CTSWP56202 376 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 TTLL11Q8NHH1 800 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 TNS1Q9HBL0 1735 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 PDE1AP54750 535 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 GBP4Q96PP9 640 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 UBR3Q6ZT12 1888 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 XRCC6P12956 609 aaKnown RBP eCLIP18.39■□□□□ 0.54
ATRX-211ENST00000623321 MX1P20591 662 aa18.39■□□□□ 0.54
ATRX-211ENST00000623321 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.54
ATRX-211ENST00000623321 C4AP0C0L4 1744 aa18.39■□□□□ 0.53
ATRX-211ENST00000623321 CD2BP2O95400 341 aaKnown RBP18.39■□□□□ 0.53
ATRX-211ENST00000623321 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
ATRX-211ENST00000623321 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
ATRX-211ENST00000623321 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 CCDC85AQ96PX6 553 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 MYH3P11055 1940 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 CIAO1O76071 339 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 MRE11P49959 708 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 GZF1Q9H116 711 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 AOX1Q06278 1338 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 EYA2O00167 538 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 ITGA6P23229 1130 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
ATRX-211ENST00000623321 RABEP1Q15276 862 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
ATRX-211ENST00000623321 GREM2Q9H772 168 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 SLC10A5Q5PT55 438 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 CLEC17AQ6ZS10 378 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 AACSQ86V21 672 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 TFCP2Q12800 502 aa18.34■□□□□ 0.53
ATRX-211ENST00000623321 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
ATRX-211ENST00000623321 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 EAF2Q96CJ1 260 aaPredicted RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 COL24A1Q17RW2 1714 aa18.34■□□□□ 0.53
ATRX-211ENST00000623321 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 GYS1P13807 737 aa18.33■□□□□ 0.53
ATRX-211ENST00000623321 CCDC152Q4G0S7 254 aa18.33■□□□□ 0.53
ATRX-211ENST00000623321 LRRC24Q50LG9 513 aa18.33■□□□□ 0.53
ATRX-211ENST00000623321 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 LAMB2P55268 1798 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 NFIXQ14938 502 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 CAMKK2Q96RR4 588 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 PUS3Q9BZE2 481 aaKnown RBP18.33■□□□□ 0.52
ATRX-211ENST00000623321 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
ATRX-211ENST00000623321 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms