RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 CDC14CA4D256 554 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 XYLBO75191 536 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 PCSK2P16519 638 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 CD33P20138 364 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
ATRX-209ENST00000623242 ORC1Q13415 861 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 XKR5Q6UX68 686 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 GPR161Q8N6U8 529 aaKnown RBP6.56□□□□□ -1.36
ATRX-209ENST00000623242 SLC30A3Q99726 388 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 GSX2Q9BZM3 304 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 TMEM63CQ9P1W3 806 aa6.56□□□□□ -1.36
ATRX-209ENST00000623242 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
ATRX-209ENST00000623242 EPB42P16452 691 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 CTBSQ01459 385 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 PLCB3Q01970 1234 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 LAMC2Q13753 1193 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 COL19A1Q14993 1142 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 BCL2L13Q9BXK5 485 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 ELP3Q9H9T3 547 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 ZFATQ9P243 1243 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 WWC3Q9ULE0 1092 aa6.55□□□□□ -1.36
ATRX-209ENST00000623242 ATXN7L1Q9ULK2 861 aaPredicted RBP6.55□□□□□ -1.36
ATRX-209ENST00000623242 NCAPD3P42695 1498 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 UNCXA6NJT0 531 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 TNFRSF21O75509 655 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 SASH3O75995 380 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 RPLP1P05386 114 aaKnown RBP6.54□□□□□ -1.36
ATRX-209ENST00000623242 ZNF16P17020 682 aaPredicted RBP6.54□□□□□ -1.36
ATRX-209ENST00000623242 FGFR3P22607 806 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 TARSP26639 723 aaKnown RBP6.54□□□□□ -1.36
ATRX-209ENST00000623242 GAS6Q14393 721 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 USPL1Q5W0Q7 1092 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 PDE12Q6L8Q7 609 aaKnown RBP6.54□□□□□ -1.36
ATRX-209ENST00000623242 SV2AQ7L0J3 742 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 CFHR5Q9BXR6 569 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 CHRDQ9H2X0 955 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 C11orf16Q9NQ32 467 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 RNF19AQ9NV58 838 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 MARK1Q9P0L2 795 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
ATRX-209ENST00000623242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
ATRX-209ENST00000623242 C2CD2LO14523 706 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 MAPK8P45983 427 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 SPEM2Q0P670 501 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 CCINQ13939 588 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
ATRX-209ENST00000623242 EAPPQ56P03 285 aaPredicted RBP6.53□□□□□ -1.36
ATRX-209ENST00000623242 KRT25Q7Z3Z0 450 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 ZNF438Q7Z4V0 828 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 RAB44Q7Z6P3 723 aaPredicted RBP6.53□□□□□ -1.36
ATRX-209ENST00000623242 CSRNP1Q96S65 589 aa6.53□□□□□ -1.36
ATRX-209ENST00000623242 FNDC3AQ9Y2H6 1198 aaKnown RBP6.53□□□□□ -1.36
ATRX-209ENST00000623242 PEG3Q9GZU2 1588 aa6.52□□□□□ -1.36
ATRX-209ENST00000623242 TOP2AP11388 1531 aaKnown RBP6.52□□□□□ -1.37
ATRX-209ENST00000623242 EIF1AYO14602 144 aaKnown RBP6.52□□□□□ -1.37
ATRX-209ENST00000623242 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
ATRX-209ENST00000623242 FAM182BQ5T319 152 aa6.52□□□□□ -1.37
ATRX-209ENST00000623242 NLRP13Q86W25 1043 aa6.52□□□□□ -1.37
ATRX-209ENST00000623242 C1orf127Q8N9H9 656 aa6.52□□□□□ -1.37
ATRX-209ENST00000623242 HMGXB3Q12766 1538 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 PNMA6FA0A0J9YX94 578 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 MMP20O60882 483 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 CYP2E1P05181 493 aaPredicted RBP6.51□□□□□ -1.37
ATRX-209ENST00000623242 NFKB1P19838 968 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 TTC16Q8NEE8 873 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 SNX29Q8TEQ0 813 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 ZFYVE28Q9HCC9 887 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 PHF24Q9UPV7 400 aa6.51□□□□□ -1.37
ATRX-209ENST00000623242 EREGO14944 169 aa6.5□□□□□ -1.37
ATRX-209ENST00000623242 LDHBP07195 334 aaKnown RBP6.5□□□□□ -1.37
ATRX-209ENST00000623242 NPM2Q86SE8 214 aaKnown RBP6.5□□□□□ -1.37
ATRX-209ENST00000623242 BHMTQ93088 406 aa6.5□□□□□ -1.37
ATRX-209ENST00000623242 CNTNAP3BQ96NU0 1288 aa6.5□□□□□ -1.37
ATRX-209ENST00000623242 TRERF1Q96PN7 1200 aa6.5□□□□□ -1.37
ATRX-209ENST00000623242 CNTNAP3Q9BZ76 1288 aa6.5□□□□□ -1.37
ATRX-209ENST00000623242 ABI2Q9NYB9 513 aaPredicted RBP6.5□□□□□ -1.37
ATRX-209ENST00000623242 KIAA1522Q9P206 1035 aaPredicted RBP6.5□□□□□ -1.37
ATRX-209ENST00000623242 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.5□□□□□ -1.37
ATRX-209ENST00000623242 CPNE3O75131 537 aaKnown RBP6.49□□□□□ -1.37
ATRX-209ENST00000623242 PHACTR2O75167 634 aa6.49□□□□□ -1.37
ATRX-209ENST00000623242 POLR3DP05423 398 aaPredicted RBP6.49□□□□□ -1.37
ATRX-209ENST00000623242 RNFT1Q5M7Z0 435 aa6.49□□□□□ -1.37
ATRX-209ENST00000623242 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
ATRX-209ENST00000623242 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
ATRX-209ENST00000623242 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
ATRX-209ENST00000623242 DNAJC25Q9H1X3 360 aa6.49□□□□□ -1.37
ATRX-209ENST00000623242 KLF15Q9UIH9 416 aa6.49□□□□□ -1.37
ATRX-209ENST00000623242 PRPF40AO75400 957 aaKnown RBP6.48□□□□□ -1.37
ATRX-209ENST00000623242 MAP3K6O95382 1288 aa6.48□□□□□ -1.37
ATRX-209ENST00000623242 RARAP10276 462 aa6.48□□□□□ -1.37
ATRX-209ENST00000623242 IRS1P35568 1242 aa6.48□□□□□ -1.37
ATRX-209ENST00000623242 KRT76Q01546 638 aa6.48□□□□□ -1.37
ATRX-209ENST00000623242 PI16Q6UXB8 463 aa6.48□□□□□ -1.37
ATRX-209ENST00000623242 DUSP9Q99956 384 aaKnown RBP6.48□□□□□ -1.37
ATRX-209ENST00000623242 COL25A1Q9BXS0 654 aaPredicted RBP6.48□□□□□ -1.37
ATRX-209ENST00000623242 TLR7Q9NYK1 1049 aaKnown RBP6.48□□□□□ -1.37
ATRX-209ENST00000623242 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
ATRX-209ENST00000623242 ZBTB42B2RXF5 422 aa6.47□□□□□ -1.37
ATRX-209ENST00000623242 TTC39BQ5VTQ0 682 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms