RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 NOL10Q9BSC4 688 aaKnown RBP16.92■□□□□ 0.3
SYNRG-231ENST00000622045 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 POLR3GO15318 223 aaPredicted RBP16.91■□□□□ 0.3
SYNRG-231ENST00000622045 LRRN4CLQ8ND94 238 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 ZNF446Q9NWS9 450 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 H3BQV1 296 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 HIP1O00291 1037 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
SYNRG-231ENST00000622045 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
SYNRG-231ENST00000622045 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
SYNRG-231ENST00000622045 CLSTN2Q9H4D0 955 aa16.91■□□□□ 0.3
SYNRG-231ENST00000622045 SPATA31D1Q6ZQQ2 1576 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 CAPN2P17655 700 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
SYNRG-231ENST00000622045 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 RIMS1Q86UR5 1692 aaKnown RBP16.9■□□□□ 0.3
SYNRG-231ENST00000622045 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 SLC27A2O14975 620 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 C11orf57Q6ZUT1 292 aaPredicted RBP16.9■□□□□ 0.3
SYNRG-231ENST00000622045 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
SYNRG-231ENST00000622045 CALCOCO1Q9P1Z2 691 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
SYNRG-231ENST00000622045 BECN2A8MW95 431 aa16.9■□□□□ 0.3
SYNRG-231ENST00000622045 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
SYNRG-231ENST00000622045 SLU7O95391 586 aaKnown RBP16.89■□□□□ 0.29
SYNRG-231ENST00000622045 ERO1AQ96HE7 468 aa16.89■□□□□ 0.29
SYNRG-231ENST00000622045 DDX19AQ9NUU7 478 aaKnown RBP16.89■□□□□ 0.29
SYNRG-231ENST00000622045 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
SYNRG-231ENST00000622045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.89■□□□□ 0.29
SYNRG-231ENST00000622045 PDIA4P13667 645 aaKnown RBP16.88■□□□□ 0.29
SYNRG-231ENST00000622045 PGBD1Q96JS3 809 aa16.88■□□□□ 0.29
SYNRG-231ENST00000622045 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
SYNRG-231ENST00000622045 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
SYNRG-231ENST00000622045 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
SYNRG-231ENST00000622045 ZBTB9Q96C00 473 aa16.88■□□□□ 0.29
SYNRG-231ENST00000622045 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
SYNRG-231ENST00000622045 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
SYNRG-231ENST00000622045 NPHP3Q7Z494 1330 aa16.87■□□□□ 0.29
SYNRG-231ENST00000622045 NRXN3Q9Y4C0 1643 aa16.87■□□□□ 0.29
SYNRG-231ENST00000622045 NEK11Q8NG66 645 aa16.87■□□□□ 0.29
SYNRG-231ENST00000622045 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
SYNRG-231ENST00000622045 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 PPFIA3O75145 1194 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 NYAP1Q6ZVC0 841 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
SYNRG-231ENST00000622045 NBPF6Q5VWK0 638 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 CCAR2Q8N163 923 aaKnown RBP16.86■□□□□ 0.29
SYNRG-231ENST00000622045 NBPF4Q96M43 638 aa16.86■□□□□ 0.29
SYNRG-231ENST00000622045 ERBB3P21860 1342 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 RPS6KB1P23443 525 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 JAK2O60674 1132 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
SYNRG-231ENST00000622045 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
SYNRG-231ENST00000622045 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 ALDH1L1O75891 902 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 HOXB7P09629 217 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 PROSER3Q2NL68 480 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
SYNRG-231ENST00000622045 ELP1O95163 1332 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 CCZ1BP86790 482 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 CCZ1P86791 482 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 ARHGAP29Q52LW3 1261 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 FTOQ9C0B1 505 aaKnown RBP eCLIP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 GRM8O00222 908 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 CLCN6P51797 869 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 SNW1Q13573 536 aaKnown RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
SYNRG-231ENST00000622045 EDC3Q96F86 508 aaKnown RBP16.84■□□□□ 0.29
SYNRG-231ENST00000622045 MTX1Q13505 466 aa16.83■□□□□ 0.29
SYNRG-231ENST00000622045 SUCLG2Q96I99 432 aa16.83■□□□□ 0.29
SYNRG-231ENST00000622045 ZFP91Q96JP5 570 aaPredicted RBP16.83■□□□□ 0.29
SYNRG-231ENST00000622045 SASH1O94885 1247 aa16.83■□□□□ 0.28
SYNRG-231ENST00000622045 IQCB1Q15051 598 aa16.83■□□□□ 0.28
SYNRG-231ENST00000622045 BRF1Q92994 677 aa16.83■□□□□ 0.28
SYNRG-231ENST00000622045 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.28
SYNRG-231ENST00000622045 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
SYNRG-231ENST00000622045 ADCY9O60503 1353 aa16.83■□□□□ 0.28
SYNRG-231ENST00000622045 AGLP35573 1532 aa16.82■□□□□ 0.28
SYNRG-231ENST00000622045 KCNB2Q92953 911 aa16.82■□□□□ 0.28
SYNRG-231ENST00000622045 HOMER1Q86YM7 354 aa16.82■□□□□ 0.28
SYNRG-231ENST00000622045 AOPEPQ8N6M6 819 aa16.82■□□□□ 0.28
SYNRG-231ENST00000622045 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
SYNRG-231ENST00000622045 ZNF589Q86UQ0 364 aaPredicted RBP16.82■□□□□ 0.28
SYNRG-231ENST00000622045 CFAP45Q9UL16 551 aa16.82■□□□□ 0.28
SYNRG-231ENST00000622045 TSPOAP1O95153 1857 aa16.81■□□□□ 0.28
SYNRG-231ENST00000622045 CYP2C19P33261 490 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms