RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 UBE2Q1Q7Z7E8 422 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 IFNL1Q8IU54 200 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 MICALL2Q8IY33 904 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 MPNDQ8N594 471 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 RPGRQ92834 1020 aaKnown RBP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 CDCA5Q96FF9 252 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 LRCH3Q96II8 777 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 TESK2Q96S53 571 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 CARD11Q9BXL7 1154 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 NIP7Q9Y221 180 aaKnown RBP eCLIP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 TESPA1A2RU30 521 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 ERVV-1B6SEH8 477 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 UBE2Q2LH0YL09 131 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 A1BGP04217 495 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 GJB1P08034 283 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 VIL1P09327 827 aaKnown RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 ZBTB48P10074 688 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 GJA8P48165 433 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 ZNF280AP59817 542 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 SCARF1Q14162 830 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 SLC9C1Q4G0N8 1177 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 TBC1D10BQ4KMP7 808 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 SPRYD7Q5W111 196 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 ZNF790Q6PG37 636 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 DPP8Q6V1X1 898 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 TMC4Q7Z404 712 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 TTC5Q8N0Z6 440 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 SLC10A4Q96EP9 437 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 NLRP3Q96P20 1036 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 GDF15Q99988 308 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 CARD14Q9BXL6 1004 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 STAP2Q9UGK3 403 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 ZBTB12Q9Y330 459 aaPredicted RBP3.27□□□□□ -1.89
CPNE3-211ENST00000621526 NRXN2Q9P2S2 1712 aa3.27□□□□□ -1.89
CPNE3-211ENST00000621526 FER1L6Q2WGJ9 1857 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 CEP290O15078 2479 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 YDJCA8MPS7 323 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 ADM5C9JUS6 153 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 PSMD14O00487 310 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 PPEF1O14829 653 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-211ENST00000621526 EGFRP00533 1210 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 NF2P35240 595 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 PTPN12Q05209 780 aaKnown RBP3.26□□□□□ -1.89
CPNE3-211ENST00000621526 MAP3K11Q16584 847 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 WASHC4Q2M389 1173 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 RBM26Q5T8P6 1007 aaKnown RBP3.26□□□□□ -1.89
CPNE3-211ENST00000621526 SULT6B1Q6IMI4 303 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 ARMC9Q7Z3E5 817 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 AGBL3Q8NEM8 1001 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 HELBQ8NG08 1087 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-211ENST00000621526 SNX27Q96L92 541 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 FMNL2Q96PY5 1086 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 USP16Q9Y5T5 823 aa3.26□□□□□ -1.89
CPNE3-211ENST00000621526 KIAA0100Q14667 2235 aaKnown RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 HEG1Q9ULI3 1381 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 MYH14Q7Z406 1995 aaKnown RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 RPTORQ8N122 1335 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 DICER1Q9UPY3 1922 aaKnown RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 TTC28Q96AY4 2481 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 SHTN1A0MZ66 631 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 TNFRSF10AO00220 468 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 EVI5O60447 810 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 SNRPA1P09661 255 aaKnown RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 HOXD10P28358 340 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 TNNT2P45379 298 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 KIF4BQ2VIQ3 1234 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 ANGEL2Q5VTE6 544 aaKnown RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 CD99L2Q8TCZ2 262 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 GGA3Q9NZ52 723 aa3.25□□□□□ -1.89
CPNE3-211ENST00000621526 ZNF330Q9Y3S2 320 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-211ENST00000621526 BRCA2P51587 3418 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 SLX4Q8IY92 1834 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 IGF2BP3O00425 579 aaKnown RBP eCLIP3.24□□□□□ -1.89
CPNE3-211ENST00000621526 TCERG1O14776 1098 aaKnown RBP3.24□□□□□ -1.89
CPNE3-211ENST00000621526 WDHD1O75717 1129 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-211ENST00000621526 SGPL1O95470 568 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 USP17L8P0C7I0 530 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 IL13P35225 146 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 BCAMP50895 628 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 TEFQ10587 303 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 MAP3K12Q12852 859 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 CRHR2Q13324 411 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 KIF22Q14807 665 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 HLFQ16534 295 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 MTHFSDQ2M296 383 aaKnown RBP3.24□□□□□ -1.89
CPNE3-211ENST00000621526 PARP10Q53GL7 1025 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 MOB2Q70IA6 237 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 Q7L0L9 218 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 PPP1R42Q7Z4L9 355 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 AEBP1Q8IUX7 1158 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 ZNF34Q8IZ26 560 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 TDHQ8IZJ6 230 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 IL17REQ8NFR9 667 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 GMLQ99445 158 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 EYA3Q99504 573 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 PTPN18Q99952 460 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 C1QTNF1Q9BXJ1 281 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 ZC3H12CQ9C0D7 883 aaKnown RBP3.24□□□□□ -1.89
CPNE3-211ENST00000621526 ZFYVE28Q9HCC9 887 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 PTCH2Q9Y6C5 1203 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms