RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 KIF20AO95235 890 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 HCLS1P14317 486 aaPredicted RBP9.63□□□□□ -0.87
GDNF-208ENST00000620847 CBX1P83916 185 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 MYD88Q99836 296 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 COPRSQ9NQ92 184 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 COL15A1P39059 1388 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 MEGF6O75095 1541 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 GTF2F1P35269 517 aaKnown RBP eCLIP9.63□□□□□ -0.87
GDNF-208ENST00000620847 RFX5P48382 616 aaPredicted RBP9.63□□□□□ -0.87
GDNF-208ENST00000620847 ANKRD1Q15327 319 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 PKD1L3Q7Z443 1732 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 ZNF589Q86UQ0 364 aaPredicted RBP9.63□□□□□ -0.87
GDNF-208ENST00000620847 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 LAMB4A4D0S4 1761 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
GDNF-208ENST00000620847 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 LARP1BQ659C4 914 aaKnown RBP9.62□□□□□ -0.87
GDNF-208ENST00000620847 BLOC1S2Q6QNY1 142 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.62□□□□□ -0.87
GDNF-208ENST00000620847 HMG20BQ9P0W2 317 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 TAF6LQ9Y6J9 622 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 ATP5JP18859 108 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 ZC3H6P61129 1189 aaKnown RBP9.62□□□□□ -0.87
GDNF-208ENST00000620847 CHAF1AQ13111 956 aaPredicted RBP9.62□□□□□ -0.87
GDNF-208ENST00000620847 TOB2Q14106 344 aaPredicted RBP9.62□□□□□ -0.87
GDNF-208ENST00000620847 ZNF496Q96IT1 587 aaPredicted RBP9.62□□□□□ -0.87
GDNF-208ENST00000620847 GLI3P10071 1580 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 TAF5LO75529 589 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 ELP1O95163 1332 aa9.62□□□□□ -0.87
GDNF-208ENST00000620847 RFX7Q2KHR2 1363 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 ADCY5O95622 1261 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 RABL6Q3YEC7 729 aaPredicted RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 CDC37L1Q7L3B6 337 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 DBNLQ9UJU6 430 aaKnown RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 KDM4AO75164 1064 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 PDCP20941 246 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 TNNI3KQ59H18 835 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 USP16Q9Y5T5 823 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 FPGT-TNNI3KV9GXZ4 949 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 TTC6Q86TZ1 520 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 IFNL2Q8IZJ0 200 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 MPNDQ8N594 471 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 TSC1Q92574 1164 aa9.61□□□□□ -0.87
GDNF-208ENST00000620847 EDC3Q96F86 508 aaKnown RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 ZNF830Q96NB3 372 aaPredicted RBP9.61□□□□□ -0.87
GDNF-208ENST00000620847 KRT85P78386 507 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 PARP4Q9UKK3 1724 aaKnown RBP9.6□□□□□ -0.87
GDNF-208ENST00000620847 LAMA4Q16363 1823 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 TFCP2Q12800 502 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 PDCL2Q8N4E4 241 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
GDNF-208ENST00000620847 DCAF5Q96JK2 942 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 C19orf44Q9H6X5 657 aa9.6□□□□□ -0.87
GDNF-208ENST00000620847 TTC12Q9H892 705 aaPredicted RBP9.6□□□□□ -0.87
GDNF-208ENST00000620847 ZNF609O15014 1411 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 CASP7P55210 303 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 KRT32Q14532 448 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 FERMT3Q86UX7 667 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 JARID2Q92833 1246 aaPredicted RBP9.59□□□□□ -0.87
GDNF-208ENST00000620847 FMNL2Q96PY5 1086 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 MYH15Q9Y2K3 1946 aa9.59□□□□□ -0.87
GDNF-208ENST00000620847 CYP27B1O15528 508 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 PIP4K2AP48426 406 aaPredicted RBP9.58□□□□□ -0.88
GDNF-208ENST00000620847 UBE3BQ7Z3V4 1068 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 HAUS7Q99871 368 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 SPTLC3Q9NUV7 552 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 AP5Z1O43299 807 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 TPM3P06753 285 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 FAM173BQ6P4H8 233 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 GTF3C6Q969F1 213 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 SCAND2PQ9GZW5 306 aaPredicted RBP9.58□□□□□ -0.88
GDNF-208ENST00000620847 TJP1Q07157 1748 aa9.58□□□□□ -0.88
GDNF-208ENST00000620847 LIG1P18858 919 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 PLBD2Q8NHP8 589 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 DBNDD2Q9BQY9 259 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
GDNF-208ENST00000620847 A0A087WZG4 1122 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms