RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
MUC1-229ENST00000620770 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
MUC1-229ENST00000620770 MEIS3Q99687 375 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 LAMB2P55268 1798 aa16.99■□□□□ 0.31
MUC1-229ENST00000620770 PDE8AO60658 829 aa16.98■□□□□ 0.31
MUC1-229ENST00000620770 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
MUC1-229ENST00000620770 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
MUC1-229ENST00000620770 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.31
MUC1-229ENST00000620770 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
MUC1-229ENST00000620770 CTSWP56202 376 aa16.97■□□□□ 0.31
MUC1-229ENST00000620770 C9orf131Q5VYM1 1079 aa16.97■□□□□ 0.31
MUC1-229ENST00000620770 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
MUC1-229ENST00000620770 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
MUC1-229ENST00000620770 SRGNP10124 158 aa16.96■□□□□ 0.31
MUC1-229ENST00000620770 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
MUC1-229ENST00000620770 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
MUC1-229ENST00000620770 EPHA10Q5JZY3 1008 aa16.96■□□□□ 0.31
MUC1-229ENST00000620770 TTLL6Q8N841 843 aa16.96■□□□□ 0.31
MUC1-229ENST00000620770 UTYO14607 1347 aa16.96■□□□□ 0.3
MUC1-229ENST00000620770 NPR1P16066 1061 aa16.95■□□□□ 0.3
MUC1-229ENST00000620770 RNF181Q9P0P0 153 aa16.95■□□□□ 0.3
MUC1-229ENST00000620770 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
MUC1-229ENST00000620770 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
MUC1-229ENST00000620770 KIF3CO14782 793 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 GNAI3P08754 354 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 MASTLQ96GX5 879 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
MUC1-229ENST00000620770 PLA2G12BQ9BX93 195 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
MUC1-229ENST00000620770 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 FER1L6Q2WGJ9 1857 aa16.94■□□□□ 0.3
MUC1-229ENST00000620770 DICER1Q9UPY3 1922 aaKnown RBP16.94■□□□□ 0.3
MUC1-229ENST00000620770 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
MUC1-229ENST00000620770 FOXO4P98177 505 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
MUC1-229ENST00000620770 FAM161AQ3B820 660 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 STYK1Q6J9G0 422 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
MUC1-229ENST00000620770 TTLL11Q8NHH1 800 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 GREM2Q9H772 168 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 KDM2BQ8NHM5 1336 aa16.93■□□□□ 0.3
MUC1-229ENST00000620770 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
MUC1-229ENST00000620770 RASSF7Q02833 373 aa16.92■□□□□ 0.3
MUC1-229ENST00000620770 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
MUC1-229ENST00000620770 CRBNQ96SW2 442 aa16.92■□□□□ 0.3
MUC1-229ENST00000620770 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
MUC1-229ENST00000620770 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
MUC1-229ENST00000620770 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
MUC1-229ENST00000620770 GNAI2P04899 355 aa16.91■□□□□ 0.3
MUC1-229ENST00000620770 PRPF40BQ6NWY9 871 aaKnown RBP16.91■□□□□ 0.3
MUC1-229ENST00000620770 CNKSR1Q969H4 720 aa16.91■□□□□ 0.3
MUC1-229ENST00000620770 MYH3P11055 1940 aa16.91■□□□□ 0.3
MUC1-229ENST00000620770 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
MUC1-229ENST00000620770 HSPA6P17066 643 aa16.9■□□□□ 0.3
MUC1-229ENST00000620770 LMNB1P20700 586 aa16.9■□□□□ 0.3
MUC1-229ENST00000620770 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
MUC1-229ENST00000620770 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
MUC1-229ENST00000620770 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
MUC1-229ENST00000620770 COL4A1P02462 1669 aa16.89■□□□□ 0.29
MUC1-229ENST00000620770 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
MUC1-229ENST00000620770 ITGA6P23229 1130 aa16.89■□□□□ 0.29
MUC1-229ENST00000620770 ALDH1B1P30837 517 aa16.89■□□□□ 0.29
MUC1-229ENST00000620770 GRAPQ13588 217 aa16.89■□□□□ 0.29
MUC1-229ENST00000620770 SLC51AQ86UW1 340 aa16.89■□□□□ 0.29
MUC1-229ENST00000620770 C16orf71Q8IYS4 520 aaPredicted RBP16.89■□□□□ 0.29
MUC1-229ENST00000620770 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
MUC1-229ENST00000620770 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
MUC1-229ENST00000620770 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
MUC1-229ENST00000620770 ANKRD18BA2A2Z9 1011 aa16.88■□□□□ 0.29
MUC1-229ENST00000620770 TOMM70O94826 608 aa16.88■□□□□ 0.29
MUC1-229ENST00000620770 CSF1RP07333 972 aa16.88■□□□□ 0.29
MUC1-229ENST00000620770 IFIT5Q13325 482 aaKnown RBP16.88■□□□□ 0.29
MUC1-229ENST00000620770 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
MUC1-229ENST00000620770 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
MUC1-229ENST00000620770 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
MUC1-229ENST00000620770 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
MUC1-229ENST00000620770 RTL9Q8NET4 1388 aa16.88■□□□□ 0.29
MUC1-229ENST00000620770 TAF1P21675 1872 aa16.87■□□□□ 0.29
MUC1-229ENST00000620770 C21orf2O43822 256 aa16.87■□□□□ 0.29
MUC1-229ENST00000620770 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
MUC1-229ENST00000620770 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
MUC1-229ENST00000620770 ZNF594Q96JF6 807 aaPredicted RBP16.87■□□□□ 0.29
MUC1-229ENST00000620770 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
MUC1-229ENST00000620770 NFKBIEO00221 500 aa16.86■□□□□ 0.29
MUC1-229ENST00000620770 OLFM4Q6UX06 510 aa16.86■□□□□ 0.29
MUC1-229ENST00000620770 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
MUC1-229ENST00000620770 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
MUC1-229ENST00000620770 SPEF2Q9C093 1822 aa16.85■□□□□ 0.29
MUC1-229ENST00000620770 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
MUC1-229ENST00000620770 IGHMBP2P38935 993 aaKnown RBP16.85■□□□□ 0.29
MUC1-229ENST00000620770 RPS8P62241 208 aaKnown RBP16.85■□□□□ 0.29
MUC1-229ENST00000620770 SOGA3Q5TF21 947 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms