RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 CCDC88AQ3V6T2 1871 aa12.1□□□□□ -0.47
SYNRG-228ENST00000620424 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
SYNRG-228ENST00000620424 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
SYNRG-228ENST00000620424 CELF1Q92879 486 aaKnown RBP12.1□□□□□ -0.47
SYNRG-228ENST00000620424 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
SYNRG-228ENST00000620424 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
SYNRG-228ENST00000620424 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
SYNRG-228ENST00000620424 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
SYNRG-228ENST00000620424 COL4A5P29400 1685 aa12.1□□□□□ -0.47
SYNRG-228ENST00000620424 TIAM2Q8IVF5 1701 aa12.09□□□□□ -0.47
SYNRG-228ENST00000620424 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYNRG-228ENST00000620424 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYNRG-228ENST00000620424 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
SYNRG-228ENST00000620424 GCKRQ14397 625 aa12.09□□□□□ -0.47
SYNRG-228ENST00000620424 SOGA3Q5TF21 947 aa12.09□□□□□ -0.47
SYNRG-228ENST00000620424 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
SYNRG-228ENST00000620424 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
SYNRG-228ENST00000620424 H7C1W4 665 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 CASP7P55210 303 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 GRAPQ13588 217 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 BEND3Q5T5X7 828 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 UBE3BQ7Z3V4 1068 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 GRAPLQ8TC17 118 aaPredicted RBP12.08□□□□□ -0.48
SYNRG-228ENST00000620424 CDHR2Q9BYE9 1310 aa12.08□□□□□ -0.48
SYNRG-228ENST00000620424 CACNA1FO60840 1977 aa12.07□□□□□ -0.48
SYNRG-228ENST00000620424 KIF3CO14782 793 aa12.07□□□□□ -0.48
SYNRG-228ENST00000620424 PDE8AO60658 829 aa12.07□□□□□ -0.48
SYNRG-228ENST00000620424 DSG3P32926 999 aa12.07□□□□□ -0.48
SYNRG-228ENST00000620424 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
SYNRG-228ENST00000620424 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
SYNRG-228ENST00000620424 BBOX1O75936 387 aa12.06□□□□□ -0.48
SYNRG-228ENST00000620424 IARSP41252 1262 aaKnown RBP12.06□□□□□ -0.48
SYNRG-228ENST00000620424 CTSWP56202 376 aa12.06□□□□□ -0.48
SYNRG-228ENST00000620424 PSMD1Q99460 953 aa12.06□□□□□ -0.48
SYNRG-228ENST00000620424 ZNF541Q9H0D2 1346 aa12.06□□□□□ -0.48
SYNRG-228ENST00000620424 DICER1Q9UPY3 1922 aaKnown RBP12.05□□□□□ -0.48
SYNRG-228ENST00000620424 DUOX1Q9NRD9 1551 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 CC2D2BQ6DHV5 1058 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 TTLL11Q8NHH1 800 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 GREM2Q9H772 168 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 SMC4Q9NTJ3 1288 aa12.05□□□□□ -0.48
SYNRG-228ENST00000620424 LRRC37AA6NMS7 1700 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 GLTPD2A6NH11 291 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 POTECB2RU33 542 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
SYNRG-228ENST00000620424 RPS8P62241 208 aaKnown RBP12.04□□□□□ -0.48
SYNRG-228ENST00000620424 GPSM2P81274 684 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 AOC3Q16853 763 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 EPHA10Q5JZY3 1008 aa12.04□□□□□ -0.48
SYNRG-228ENST00000620424 GPR101Q96P66 508 aaPredicted RBP12.04□□□□□ -0.48
SYNRG-228ENST00000620424 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
SYNRG-228ENST00000620424 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
SYNRG-228ENST00000620424 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
SYNRG-228ENST00000620424 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
SYNRG-228ENST00000620424 FOXO4P98177 505 aa12.03□□□□□ -0.48
SYNRG-228ENST00000620424 FAM161AQ3B820 660 aa12.03□□□□□ -0.48
SYNRG-228ENST00000620424 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
SYNRG-228ENST00000620424 DPP8Q6V1X1 898 aaPredicted RBP12.03□□□□□ -0.48
SYNRG-228ENST00000620424 MPNDQ8N594 471 aa12.03□□□□□ -0.48
SYNRG-228ENST00000620424 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
SYNRG-228ENST00000620424 GRM8O00222 908 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 ALDH1L1O75891 902 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 PLA2G12BQ9BX93 195 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 RTFDC1Q9BY42 306 aaPredicted RBP12.02□□□□□ -0.49
SYNRG-228ENST00000620424 SRCIN1Q9C0H9 1055 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 POLLQ9UGP5 575 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 NOB1Q9ULX3 412 aaKnown RBP12.02□□□□□ -0.49
SYNRG-228ENST00000620424 TNNQ9UQP3 1299 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 PTPRCP08575 1304 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 LTBP1Q14766 1721 aa12.02□□□□□ -0.49
SYNRG-228ENST00000620424 FZD9O00144 591 aa12.01□□□□□ -0.49
SYNRG-228ENST00000620424 CSF1RP07333 972 aa12.01□□□□□ -0.49
SYNRG-228ENST00000620424 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
SYNRG-228ENST00000620424 HSP90B1P14625 803 aaKnown RBP12.01□□□□□ -0.49
SYNRG-228ENST00000620424 KAZALD1Q96I82 304 aa12.01□□□□□ -0.49
SYNRG-228ENST00000620424 SUCLG2Q96I99 432 aa12.01□□□□□ -0.49
SYNRG-228ENST00000620424 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
SYNRG-228ENST00000620424 SPEF2Q9C093 1822 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 MYH3P11055 1940 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 BCAR3O75815 825 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 NBPF7P0C2Y1 421 aaPredicted RBP12□□□□□ -0.49
SYNRG-228ENST00000620424 ITGA6P23229 1130 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 TMC4Q7Z404 712 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
SYNRG-228ENST00000620424 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 RTL9Q8NET4 1388 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 WDR90Q96KV7 1748 aa12□□□□□ -0.49
SYNRG-228ENST00000620424 YDJCA8MPS7 323 aa11.99□□□□□ -0.49
SYNRG-228ENST00000620424 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
SYNRG-228ENST00000620424 KIAA2012Q0VF49 1180 aa11.99□□□□□ -0.49
SYNRG-228ENST00000620424 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
SYNRG-228ENST00000620424 LMBR1LQ6UX01 489 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms