RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CDHR2Q9BYE9 1310 aa10.02□□□□□ -0.81
CPNE3-209ENST00000620393 FAM177BA6PVY3 158 aa10.01□□□□□ -0.81
CPNE3-209ENST00000620393 CSF1RP07333 972 aa10.01□□□□□ -0.81
CPNE3-209ENST00000620393 RABL6Q3YEC7 729 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-209ENST00000620393 NBPF5PQ86XG9 351 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-209ENST00000620393 SSH3Q8TE77 659 aa10.01□□□□□ -0.81
CPNE3-209ENST00000620393 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
CPNE3-209ENST00000620393 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
CPNE3-209ENST00000620393 TSPYL2Q9H2G4 693 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-209ENST00000620393 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
CPNE3-209ENST00000620393 TNS1Q9HBL0 1735 aaKnown RBP10.01□□□□□ -0.81
CPNE3-209ENST00000620393 PNMA6EA0A0J9YXQ4 647 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 SRGAP3O43295 1099 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 PDE8AO60658 829 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 SERPINB2P05120 415 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
CPNE3-209ENST00000620393 ERFEQ4G0M1 354 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 LMBR1LQ6UX01 489 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
CPNE3-209ENST00000620393 DCTPP1Q9H773 170 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 KDM2BQ8NHM5 1336 aa10□□□□□ -0.81
CPNE3-209ENST00000620393 HCLS1P14317 486 aaPredicted RBP9.99□□□□□ -0.81
CPNE3-209ENST00000620393 NUTM1Q86Y26 1132 aa9.99□□□□□ -0.81
CPNE3-209ENST00000620393 SMC5Q8IY18 1101 aa9.99□□□□□ -0.81
CPNE3-209ENST00000620393 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
CPNE3-209ENST00000620393 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
CPNE3-209ENST00000620393 PHF12Q96QT6 1004 aa9.99□□□□□ -0.81
CPNE3-209ENST00000620393 RGPD3A6NKT7 1758 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-209ENST00000620393 RGPD4Q7Z3J3 1758 aa9.98□□□□□ -0.81
CPNE3-209ENST00000620393 TAF1LQ8IZX4 1826 aa9.98□□□□□ -0.81
CPNE3-209ENST00000620393 POLRMTO00411 1230 aaKnown RBP9.98□□□□□ -0.81
CPNE3-209ENST00000620393 RFX5P48382 616 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-209ENST00000620393 DDR1Q08345 913 aa9.98□□□□□ -0.81
CPNE3-209ENST00000620393 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
CPNE3-209ENST00000620393 PDGFDQ9GZP0 370 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-209ENST00000620393 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
CPNE3-209ENST00000620393 CARMIL3Q8ND23 1372 aa9.98□□□□□ -0.81
CPNE3-209ENST00000620393 POTEMA6NI47 508 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 MMP10P09238 476 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 CTSWP56202 376 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 PRR5LQ6MZQ0 368 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 NLRP3Q96P20 1036 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
CPNE3-209ENST00000620393 NPHP1O15259 732 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 RAB11FIP3O75154 756 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
CPNE3-209ENST00000620393 PTPN12Q05209 780 aaKnown RBP9.96□□□□□ -0.82
CPNE3-209ENST00000620393 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.82
CPNE3-209ENST00000620393 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
CPNE3-209ENST00000620393 CCDC57Q2TAC2 916 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 CCDC152Q4G0S7 254 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 HSP90AB4PQ58FF6 505 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 MSL1Q68DK7 614 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 CCDC24Q8N4L8 307 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 NUP188Q5SRE5 1749 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 ARFGEF2Q9Y6D5 1785 aa9.96□□□□□ -0.82
CPNE3-209ENST00000620393 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-209ENST00000620393 ST5P78524 1137 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 NUCB1Q02818 461 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPNE3-209ENST00000620393 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-209ENST00000620393 BRIP1Q9BX63 1249 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 GREM2Q9H772 168 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 PA2G4Q9UQ80 394 aaKnown RBP9.95□□□□□ -0.82
CPNE3-209ENST00000620393 UBR3Q6ZT12 1888 aa9.95□□□□□ -0.82
CPNE3-209ENST00000620393 KLRG2A4D1S0 409 aaPredicted RBP9.94□□□□□ -0.82
CPNE3-209ENST00000620393 POTEIP0CG38 1075 aa9.94□□□□□ -0.82
CPNE3-209ENST00000620393 ITGA6P23229 1130 aa9.94□□□□□ -0.82
CPNE3-209ENST00000620393 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
CPNE3-209ENST00000620393 KLHDC4Q8TBB5 520 aa9.94□□□□□ -0.82
CPNE3-209ENST00000620393 PDZRN3Q9UPQ7 1066 aa9.94□□□□□ -0.82
CPNE3-209ENST00000620393 EXOC6BQ9Y2D4 811 aa9.94□□□□□ -0.82
CPNE3-209ENST00000620393 NUP98P52948 1817 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 RTL9Q8NET4 1388 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 EYA2O00167 538 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 TAF7LQ5H9L4 462 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 CHD1LQ86WJ1 897 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 KIF1BPQ96EK5 621 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 ZNF594Q96JF6 807 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-209ENST00000620393 MTFR1LQ9H019 292 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
CPNE3-209ENST00000620393 PSDA5PKW4 1024 aaPredicted RBP9.92□□□□□ -0.82
CPNE3-209ENST00000620393 CIAO1O76071 339 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 SASH1O94885 1247 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 ZBTB7AO95365 584 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 PDE6BP35913 854 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 IL15P40933 162 aaPredicted RBP9.92□□□□□ -0.82
CPNE3-209ENST00000620393 OS9Q13438 667 aaPredicted RBP9.92□□□□□ -0.82
CPNE3-209ENST00000620393 CRY2Q49AN0 593 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 LDHAL6AQ6ZMR3 332 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
CPNE3-209ENST00000620393 ATG9AQ7Z3C6 839 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms