RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 ARFGEF1Q9Y6D6 1849 aa16.28■□□□□ 0.2
SRSF3-206ENST00000620242 RTL9Q8NET4 1388 aa16.27■□□□□ 0.2
SRSF3-206ENST00000620242 UTYO14607 1347 aa16.27■□□□□ 0.2
SRSF3-206ENST00000620242 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
SRSF3-206ENST00000620242 GNAI3P08754 354 aa16.27■□□□□ 0.2
SRSF3-206ENST00000620242 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
SRSF3-206ENST00000620242 SYNE4Q8N205 404 aa16.27■□□□□ 0.2
SRSF3-206ENST00000620242 LAMB2P55268 1798 aa16.26■□□□□ 0.19
SRSF3-206ENST00000620242 ABCC4O15439 1325 aa16.26■□□□□ 0.19
SRSF3-206ENST00000620242 C21orf2O43822 256 aa16.26■□□□□ 0.19
SRSF3-206ENST00000620242 TRIM27P14373 513 aa16.26■□□□□ 0.19
SRSF3-206ENST00000620242 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
SRSF3-206ENST00000620242 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 UBTFL1P0CB47 393 aaPredicted RBP16.25■□□□□ 0.19
SRSF3-206ENST00000620242 CASP7P55210 303 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
SRSF3-206ENST00000620242 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
SRSF3-206ENST00000620242 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
SRSF3-206ENST00000620242 CSF1RP07333 972 aa16.24■□□□□ 0.19
SRSF3-206ENST00000620242 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
SRSF3-206ENST00000620242 C7orf43Q8WVR3 580 aa16.24■□□□□ 0.19
SRSF3-206ENST00000620242 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
SRSF3-206ENST00000620242 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
SRSF3-206ENST00000620242 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
SRSF3-206ENST00000620242 DDX60Q8IY21 1712 aaKnown RBP16.23■□□□□ 0.19
SRSF3-206ENST00000620242 ANKRD18BA2A2Z9 1011 aa16.23■□□□□ 0.19
SRSF3-206ENST00000620242 IFIT5Q13325 482 aaKnown RBP16.23■□□□□ 0.19
SRSF3-206ENST00000620242 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
SRSF3-206ENST00000620242 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
SRSF3-206ENST00000620242 PSMD1Q99460 953 aa16.23■□□□□ 0.19
SRSF3-206ENST00000620242 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
SRSF3-206ENST00000620242 LMNB1P20700 586 aa16.22■□□□□ 0.19
SRSF3-206ENST00000620242 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
SRSF3-206ENST00000620242 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
SRSF3-206ENST00000620242 MPHOSPH8Q99549 860 aa16.22■□□□□ 0.19
SRSF3-206ENST00000620242 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
SRSF3-206ENST00000620242 ITGA6P23229 1130 aa16.21■□□□□ 0.19
SRSF3-206ENST00000620242 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
SRSF3-206ENST00000620242 BSDC1Q9NW68 430 aaPredicted RBP16.21■□□□□ 0.19
SRSF3-206ENST00000620242 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
SRSF3-206ENST00000620242 MYH3P11055 1940 aa16.21■□□□□ 0.19
SRSF3-206ENST00000620242 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
SRSF3-206ENST00000620242 LMBR1LQ6UX01 489 aa16.2■□□□□ 0.18
SRSF3-206ENST00000620242 DPP8Q6V1X1 898 aaPredicted RBP16.2■□□□□ 0.18
SRSF3-206ENST00000620242 MPNDQ8N594 471 aa16.2■□□□□ 0.18
SRSF3-206ENST00000620242 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
SRSF3-206ENST00000620242 GREM2Q9H772 168 aa16.2■□□□□ 0.18
SRSF3-206ENST00000620242 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
SRSF3-206ENST00000620242 SLX4Q8IY92 1834 aa16.19■□□□□ 0.18
SRSF3-206ENST00000620242 CHD4Q14839 1912 aa16.19■□□□□ 0.18
SRSF3-206ENST00000620242 FOXO4P98177 505 aa16.19■□□□□ 0.18
SRSF3-206ENST00000620242 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
SRSF3-206ENST00000620242 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
SRSF3-206ENST00000620242 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
SRSF3-206ENST00000620242 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
SRSF3-206ENST00000620242 EYA3Q99504 573 aa16.19■□□□□ 0.18
SRSF3-206ENST00000620242 GNAI2P04899 355 aa16.18■□□□□ 0.18
SRSF3-206ENST00000620242 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
SRSF3-206ENST00000620242 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
SRSF3-206ENST00000620242 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
SRSF3-206ENST00000620242 GOLGB1Q14789 3259 aaKnown RBP16.18■□□□□ 0.18
SRSF3-206ENST00000620242 NFKBIEO00221 500 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 YY1P25490 414 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
SRSF3-206ENST00000620242 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
SRSF3-206ENST00000620242 BICC1Q9H694 974 aaKnown RBP16.17■□□□□ 0.18
SRSF3-206ENST00000620242 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 ANKIB1Q9P2G1 1089 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 XDHP47989 1333 aa16.17■□□□□ 0.18
SRSF3-206ENST00000620242 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
SRSF3-206ENST00000620242 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
SRSF3-206ENST00000620242 ATP2B4P23634 1241 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 DPY19L2Q6NUT2 758 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 LDHAL6AQ6ZMR3 332 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 MEIS3Q99687 375 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 CNNM1Q9NRU3 951 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
SRSF3-206ENST00000620242 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
SRSF3-206ENST00000620242 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
SRSF3-206ENST00000620242 MVPQ14764 893 aaKnown RBP16.14■□□□□ 0.17
SRSF3-206ENST00000620242 LEMD3Q9Y2U8 911 aa16.14■□□□□ 0.17
SRSF3-206ENST00000620242 UTRNP46939 3433 aa16.13■□□□□ 0.17
SRSF3-206ENST00000620242 C6orf229H3BNL8 230 aa16.13■□□□□ 0.17
SRSF3-206ENST00000620242 RASSF7Q02833 373 aa16.13■□□□□ 0.17
SRSF3-206ENST00000620242 MTX1Q13505 466 aa16.13■□□□□ 0.17
SRSF3-206ENST00000620242 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
SRSF3-206ENST00000620242 LARGE2Q8N3Y3 721 aa16.13■□□□□ 0.17
SRSF3-206ENST00000620242 KAZALD1Q96I82 304 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms