RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 HSPA4P34932 840 aa24.39■■□□□ 1.5
MMP28-207ENST00000619655 NMIQ13287 307 aaPredicted RBP24.39■■□□□ 1.5
MMP28-207ENST00000619655 IFIT5Q13325 482 aaKnown RBP24.39■■□□□ 1.5
MMP28-207ENST00000619655 SPATA31A6Q5VVP1 1343 aa24.39■■□□□ 1.49
MMP28-207ENST00000619655 IRS4O14654 1257 aaPredicted RBP24.39■■□□□ 1.49
MMP28-207ENST00000619655 UPF3BQ9BZI7 483 aaKnown RBP24.39■■□□□ 1.49
MMP28-207ENST00000619655 ANAPC15P60006 121 aa24.38■■□□□ 1.49
MMP28-207ENST00000619655 NOL8Q76FK4 1167 aaKnown RBP24.38■■□□□ 1.49
MMP28-207ENST00000619655 PTF1AQ7RTS3 328 aa24.38■■□□□ 1.49
MMP28-207ENST00000619655 CERKQ8TCT0 537 aa24.38■■□□□ 1.49
MMP28-207ENST00000619655 SMARCC1Q92922 1105 aaPredicted RBP24.38■■□□□ 1.49
MMP28-207ENST00000619655 DDIT3P35638 169 aa24.38■■□□□ 1.49
MMP28-207ENST00000619655 PLA2G12BQ9BX93 195 aa24.38■■□□□ 1.49
MMP28-207ENST00000619655 MYH14Q7Z406 1995 aaKnown RBP24.37■■□□□ 1.49
MMP28-207ENST00000619655 GREM2Q9H772 168 aa24.37■■□□□ 1.49
MMP28-207ENST00000619655 CDHR2Q9BYE9 1310 aa24.37■■□□□ 1.49
MMP28-207ENST00000619655 CIAO1O76071 339 aa24.36■■□□□ 1.49
MMP28-207ENST00000619655 PTH1RQ03431 593 aa24.36■■□□□ 1.49
MMP28-207ENST00000619655 A0A1B0GUL7 405 aa24.36■■□□□ 1.49
MMP28-207ENST00000619655 HIP1O00291 1037 aa24.36■■□□□ 1.49
MMP28-207ENST00000619655 CSF1RP07333 972 aa24.36■■□□□ 1.49
MMP28-207ENST00000619655 CEP126Q9P2H0 1117 aa24.36■■□□□ 1.49
MMP28-207ENST00000619655 A0A0D9SFI3 127 aa24.35■■□□□ 1.49
MMP28-207ENST00000619655 ITGA6P23229 1130 aa24.35■■□□□ 1.49
MMP28-207ENST00000619655 CTSWP56202 376 aa24.35■■□□□ 1.49
MMP28-207ENST00000619655 TTLL11Q8NHH1 800 aa24.35■■□□□ 1.49
MMP28-207ENST00000619655 HSPA1LP34931 641 aa24.35■■□□□ 1.49
MMP28-207ENST00000619655 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
MMP28-207ENST00000619655 DDX46Q7L014 1031 aaKnown RBP24.35■■□□□ 1.49
MMP28-207ENST00000619655 ZNF34Q8IZ26 560 aa24.35■■□□□ 1.49
MMP28-207ENST00000619655 EPB41L2O43491 1005 aaKnown RBP24.34■■□□□ 1.49
MMP28-207ENST00000619655 ZNF609O15014 1411 aa24.34■■□□□ 1.49
MMP28-207ENST00000619655 RASEFQ8IZ41 740 aa24.33■■□□□ 1.49
MMP28-207ENST00000619655 HAUS7Q99871 368 aa24.33■■□□□ 1.49
MMP28-207ENST00000619655 GPR108Q9NPR9 543 aa24.33■■□□□ 1.49
MMP28-207ENST00000619655 SNX14Q9Y5W7 946 aa24.33■■□□□ 1.49
MMP28-207ENST00000619655 SUSD4Q5VX71 490 aa24.33■■□□□ 1.48
MMP28-207ENST00000619655 MYH3P11055 1940 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 CAMTA2O94983 1202 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 CHGBP05060 677 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 KCNJ4P48050 445 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 LINC00116Q8NCU8 138 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 PRPF40BQ6NWY9 871 aaKnown RBP24.32■■□□□ 1.48
MMP28-207ENST00000619655 LDHAL6AQ6ZMR3 332 aa24.32■■□□□ 1.48
MMP28-207ENST00000619655 ANKRD18BA2A2Z9 1011 aa24.31■■□□□ 1.48
MMP28-207ENST00000619655 PDE8AO60658 829 aa24.31■■□□□ 1.48
MMP28-207ENST00000619655 HCLS1P14317 486 aaPredicted RBP24.31■■□□□ 1.48
MMP28-207ENST00000619655 GOLIM4O00461 696 aa24.3■■□□□ 1.48
MMP28-207ENST00000619655 CIZ1Q9ULV3 898 aaPredicted RBP24.3■■□□□ 1.48
MMP28-207ENST00000619655 NIP7Q9Y221 180 aaKnown RBP eCLIP24.3■■□□□ 1.48
MMP28-207ENST00000619655 GORABQ5T7V8 394 aa24.3■■□□□ 1.48
MMP28-207ENST00000619655 CNNM1Q9NRU3 951 aa24.3■■□□□ 1.48
MMP28-207ENST00000619655 METTL24Q5JXM2 366 aa24.29■■□□□ 1.48
MMP28-207ENST00000619655 ZNF589Q86UQ0 364 aaPredicted RBP24.29■■□□□ 1.48
MMP28-207ENST00000619655 ZGPATQ8N5A5 531 aaKnown RBP24.29■■□□□ 1.48
MMP28-207ENST00000619655 ADORA1P30542 326 aa24.29■■□□□ 1.48
MMP28-207ENST00000619655 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
MMP28-207ENST00000619655 TMX3Q96JJ7 454 aa24.29■■□□□ 1.48
MMP28-207ENST00000619655 RREB1Q92766 1687 aa24.29■■□□□ 1.48
MMP28-207ENST00000619655 AFF2P51816 1311 aa24.28■■□□□ 1.48
MMP28-207ENST00000619655 SH3TC1Q8TE82 1336 aa24.28■■□□□ 1.48
MMP28-207ENST00000619655 COL5A3P25940 1745 aaPredicted RBP24.28■■□□□ 1.48
MMP28-207ENST00000619655 IFIT1P09914 478 aaKnown RBP24.28■■□□□ 1.48
MMP28-207ENST00000619655 TNPO1Q92973 898 aaKnown RBP24.28■■□□□ 1.48
MMP28-207ENST00000619655 UTP14AQ9BVJ6 771 aaKnown RBP24.28■■□□□ 1.48
MMP28-207ENST00000619655 PAG1Q9NWQ8 432 aa24.28■■□□□ 1.48
MMP28-207ENST00000619655 AKAP2Q9Y2D5 859 aa24.28■■□□□ 1.48
MMP28-207ENST00000619655 GJD4Q96KN9 370 aaPredicted RBP24.28■■□□□ 1.48
MMP28-207ENST00000619655 FBXO3Q9UK99 471 aa24.28■■□□□ 1.48
MMP28-207ENST00000619655 RBM8AQ9Y5S9 174 aaKnown RBP24.28■■□□□ 1.48
MMP28-207ENST00000619655 XAGE2Q96GT9 111 aa24.27■■□□□ 1.48
MMP28-207ENST00000619655 CPA1P15085 419 aa24.27■■□□□ 1.48
MMP28-207ENST00000619655 RAB3GAP1Q15042 981 aa24.27■■□□□ 1.48
MMP28-207ENST00000619655 IL17RAQ96F46 866 aa24.27■■□□□ 1.48
MMP28-207ENST00000619655 SEC62Q99442 399 aaKnown RBP24.27■■□□□ 1.48
MMP28-207ENST00000619655 EP400Q96L91 3159 aa24.27■■□□□ 1.48
MMP28-207ENST00000619655 CICQ96RK0 1608 aaPredicted RBP24.26■■□□□ 1.47
MMP28-207ENST00000619655 CASTP20810 708 aaKnown RBP24.26■■□□□ 1.47
MMP28-207ENST00000619655 MCM4P33991 863 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 MCM2P49736 904 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 MED23Q9ULK4 1368 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 CCDC158Q5M9N0 1113 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 TTC39AQ5SRH9 613 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 KBTBD3Q8NAB2 608 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 RIPOR2Q9Y4F9 1068 aa24.26■■□□□ 1.47
MMP28-207ENST00000619655 RIC1Q4ADV7 1423 aa24.25■■□□□ 1.47
MMP28-207ENST00000619655 THSD7AQ9UPZ6 1657 aa24.25■■□□□ 1.47
MMP28-207ENST00000619655 FKBP4Q02790 459 aaKnown RBP eCLIP24.25■■□□□ 1.47
MMP28-207ENST00000619655 SLFNL1Q499Z3 407 aa24.25■■□□□ 1.47
MMP28-207ENST00000619655 CCDC129Q6ZRS4 1044 aa24.25■■□□□ 1.47
MMP28-207ENST00000619655 MAP4K1Q92918 833 aa24.25■■□□□ 1.47
MMP28-207ENST00000619655 SNRKQ9NRH2 765 aa24.25■■□□□ 1.47
MMP28-207ENST00000619655 SSFA2P28290 1259 aa24.24■■□□□ 1.47
MMP28-207ENST00000619655 ADCK5Q3MIX3 580 aa24.24■■□□□ 1.47
MMP28-207ENST00000619655 JAKMIP1Q96N16 626 aaKnown RBP24.24■■□□□ 1.47
MMP28-207ENST00000619655 BTAF1O14981 1849 aa24.24■■□□□ 1.47
MMP28-207ENST00000619655 NECTIN1Q15223 517 aa24.24■■□□□ 1.47
MMP28-207ENST00000619655 PARP10Q53GL7 1025 aa24.24■■□□□ 1.47
MMP28-207ENST00000619655 LARP6Q9BRS8 491 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms