RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 PKD1L3Q7Z443 1732 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
TP53-225ENST00000619485 LETM1O95202 739 aaPredicted RBP12.34□□□□□ -0.43
TP53-225ENST00000619485 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
TP53-225ENST00000619485 MYRIPQ8NFW9 859 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 HYPKQ9NX55 129 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
TP53-225ENST00000619485 IFIT2P09913 472 aaKnown RBP12.33□□□□□ -0.44
TP53-225ENST00000619485 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 C9orf78Q9NZ63 289 aaPredicted RBP12.33□□□□□ -0.44
TP53-225ENST00000619485 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 GLRX3O76003 335 aaKnown RBP12.33□□□□□ -0.44
TP53-225ENST00000619485 POLA2Q14181 598 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
TP53-225ENST00000619485 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
TP53-225ENST00000619485 DBF4Q9UBU7 674 aaPredicted RBP12.33□□□□□ -0.44
TP53-225ENST00000619485 TOGARAM1Q9Y4F4 1720 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
TP53-225ENST00000619485 MTERF4Q7Z6M4 381 aaKnown RBP12.32□□□□□ -0.44
TP53-225ENST00000619485 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 OVOS2A0A0G2JMS6 1433 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 CPDO75976 1380 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
TP53-225ENST00000619485 STK3Q13188 491 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 AACSQ86V21 672 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 SIL1Q9H173 461 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
TP53-225ENST00000619485 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 AP5Z1O43299 807 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 A1BGP04217 495 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
TP53-225ENST00000619485 ME3Q16798 604 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
TP53-225ENST00000619485 MYD88Q99836 296 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 BICC1Q9H694 974 aaKnown RBP12.31□□□□□ -0.44
TP53-225ENST00000619485 PXDNLA1KZ92 1463 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 CHGBP05060 677 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 KSR2Q6VAB6 950 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 TLR7Q9NYK1 1049 aaKnown RBP12.31□□□□□ -0.44
TP53-225ENST00000619485 PYCARDQ9ULZ3 195 aa12.31□□□□□ -0.44
TP53-225ENST00000619485 CCDC192P0DO97 292 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 CABP4P57796 275 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
TP53-225ENST00000619485 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
TP53-225ENST00000619485 HSP90AB4PQ58FF6 505 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 CHAF1AQ13111 956 aaPredicted RBP12.3□□□□□ -0.44
TP53-225ENST00000619485 LUZP1Q86V48 1076 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
TP53-225ENST00000619485 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
TP53-225ENST00000619485 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
TP53-225ENST00000619485 TPCN1Q9ULQ1 816 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
TP53-225ENST00000619485 NDUFB9Q9Y6M9 179 aa12.3□□□□□ -0.44
TP53-225ENST00000619485 CBX1P83916 185 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 VPS53Q5VIR6 699 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 KRT85P78386 507 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
TP53-225ENST00000619485 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 KCNF1Q9H3M0 494 aa12.29□□□□□ -0.44
TP53-225ENST00000619485 MRC1P22897 1456 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 NHSL1Q5SYE7 1610 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 EPB41L2O43491 1005 aaKnown RBP12.28□□□□□ -0.44
TP53-225ENST00000619485 HOXB7P09629 217 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 LIG1P18858 919 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 PTGS1P23219 599 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
TP53-225ENST00000619485 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
TP53-225ENST00000619485 GTF2E1P29083 439 aaPredicted RBP12.28□□□□□ -0.44
TP53-225ENST00000619485 NMIQ13287 307 aaPredicted RBP12.28□□□□□ -0.44
TP53-225ENST00000619485 CREB3L3Q68CJ9 461 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 CCDC94Q9BW85 323 aaPredicted RBP12.28□□□□□ -0.44
TP53-225ENST00000619485 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
TP53-225ENST00000619485 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms