RNA–Protein interactions for RNA: ENST00000619299.4

CWC25-204, Transcript of CWC25 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC25, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC25-204ENST00000619299 CHMP3Q9Y3E7 222 aa15.05■□□□□ -0
CWC25-204ENST00000619299 MYH3P11055 1940 aa15.05■□□□□ -0
CWC25-204ENST00000619299 TAF1P21675 1872 aa15.05■□□□□ -0
CWC25-204ENST00000619299 CASZ1Q86V15 1759 aa15.04■□□□□ -0
CWC25-204ENST00000619299 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
CWC25-204ENST00000619299 SMARCA5O60264 1052 aaPredicted RBP15.04■□□□□ -0
CWC25-204ENST00000619299 CSF1RP07333 972 aa15.04■□□□□ -0
CWC25-204ENST00000619299 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
CWC25-204ENST00000619299 FLAD1Q8NFF5 587 aa15.04■□□□□ -0
CWC25-204ENST00000619299 ZNF594Q96JF6 807 aaPredicted RBP15.04■□□□□ -0
CWC25-204ENST00000619299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.04■□□□□ -0
CWC25-204ENST00000619299 COL4A1P02462 1669 aa15.04■□□□□ -0
CWC25-204ENST00000619299 POLRMTO00411 1230 aaKnown RBP15.03■□□□□ -0
CWC25-204ENST00000619299 FAM161AQ3B820 660 aa15.03■□□□□ -0
CWC25-204ENST00000619299 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
CWC25-204ENST00000619299 GREM2Q9H772 168 aa15.03■□□□□ -0
CWC25-204ENST00000619299 PDE8AO60658 829 aa15.03■□□□□ -0
CWC25-204ENST00000619299 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
CWC25-204ENST00000619299 SERPINB2P05120 415 aa15.03■□□□□ -0
CWC25-204ENST00000619299 CTSWP56202 376 aa15.03■□□□□ -0
CWC25-204ENST00000619299 PTPN12Q05209 780 aaKnown RBP15.03■□□□□ -0
CWC25-204ENST00000619299 C8orf34Q49A92 452 aa15.03■□□□□ -0
CWC25-204ENST00000619299 CARMIL3Q8ND23 1372 aa15.03■□□□□ -0
CWC25-204ENST00000619299 HMMRO75330 724 aa15.02■□□□□ -0
CWC25-204ENST00000619299 ANKRD45Q5TZF3 282 aa15.02■□□□□ -0
CWC25-204ENST00000619299 PRR5LQ6MZQ0 368 aa15.02■□□□□ -0
CWC25-204ENST00000619299 SIL1Q9H173 461 aa15.02■□□□□ -0
CWC25-204ENST00000619299 HDAC5Q9UQL6 1122 aa15.02■□□□□ -0
CWC25-204ENST00000619299 LAMB2P55268 1798 aa15.02□□□□□ -0.01
CWC25-204ENST00000619299 MMP10P09238 476 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 GTF2E1P29083 439 aaPredicted RBP15.01□□□□□ -0.01
CWC25-204ENST00000619299 SLC10A5Q5PT55 438 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 C16orf71Q8IYS4 520 aaPredicted RBP15.01□□□□□ -0.01
CWC25-204ENST00000619299 NLGN1Q8N2Q7 840 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 SEC31BQ9NQW1 1179 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 TNRC6CQ9HCJ0 1690 aaKnown RBP15.01□□□□□ -0.01
CWC25-204ENST00000619299 R3HDM1Q15032 1099 aaKnown RBP15.01□□□□□ -0.01
CWC25-204ENST00000619299 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 PUS3Q9BZE2 481 aaKnown RBP15.01□□□□□ -0.01
CWC25-204ENST00000619299 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
CWC25-204ENST00000619299 NUCB1Q02818 461 aa15□□□□□ -0.01
CWC25-204ENST00000619299 NYXQ9GZU5 481 aa15□□□□□ -0.01
CWC25-204ENST00000619299 PSDA5PKW4 1024 aaPredicted RBP14.99□□□□□ -0.01
CWC25-204ENST00000619299 ITGA6P23229 1130 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 LRRC24Q50LG9 513 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 OTUD7AQ8TE49 926 aaPredicted RBP14.99□□□□□ -0.01
CWC25-204ENST00000619299 SASH1O94885 1247 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 SLC51AQ86UW1 340 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 PKNOX2Q96KN3 472 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 IL1RAPL2Q9NP60 686 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 COPRSQ9NQ92 184 aa14.99□□□□□ -0.01
CWC25-204ENST00000619299 RGS3P49796 1198 aa14.98□□□□□ -0.01
CWC25-204ENST00000619299 CHD1LQ86WJ1 897 aa14.98□□□□□ -0.01
CWC25-204ENST00000619299 ANKRD31Q8N7Z5 1873 aa14.98□□□□□ -0.01
CWC25-204ENST00000619299 NPHP1O15259 732 aa14.97□□□□□ -0.01
CWC25-204ENST00000619299 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
CWC25-204ENST00000619299 CCDC57Q2TAC2 916 aa14.97□□□□□ -0.01
CWC25-204ENST00000619299 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
CWC25-204ENST00000619299 NRXN2Q9P2S2 1712 aa14.97□□□□□ -0.01
CWC25-204ENST00000619299 IFIT5Q13325 482 aaKnown RBP14.97□□□□□ -0.01
CWC25-204ENST00000619299 SF3B3Q15393 1217 aaKnown RBP14.97□□□□□ -0.01
CWC25-204ENST00000619299 RHPN1Q8TCX5 695 aa14.97□□□□□ -0.01
CWC25-204ENST00000619299 SPEF2Q9C093 1822 aa14.96□□□□□ -0.01
CWC25-204ENST00000619299 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
CWC25-204ENST00000619299 OS9Q13438 667 aaPredicted RBP14.95□□□□□ -0.02
CWC25-204ENST00000619299 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
CWC25-204ENST00000619299 PARP3Q9Y6F1 533 aa14.95□□□□□ -0.02
CWC25-204ENST00000619299 ANKRD18BA2A2Z9 1011 aa14.95□□□□□ -0.02
CWC25-204ENST00000619299 G3BP1Q13283 466 aaKnown RBP eCLIP14.95□□□□□ -0.02
CWC25-204ENST00000619299 CCDC152Q4G0S7 254 aa14.95□□□□□ -0.02
CWC25-204ENST00000619299 CELF1Q92879 486 aaKnown RBP14.95□□□□□ -0.02
CWC25-204ENST00000619299 LRRCC1Q9C099 1032 aa14.95□□□□□ -0.02
CWC25-204ENST00000619299 EYA2O00167 538 aa14.94□□□□□ -0.02
CWC25-204ENST00000619299 TFCP2Q12800 502 aa14.94□□□□□ -0.02
CWC25-204ENST00000619299 RAB11FIP3O75154 756 aa14.93□□□□□ -0.02
CWC25-204ENST00000619299 ST5P78524 1137 aa14.93□□□□□ -0.02
CWC25-204ENST00000619299 RIPOR2Q9Y4F9 1068 aa14.93□□□□□ -0.02
CWC25-204ENST00000619299 TAF7LQ5H9L4 462 aa14.93□□□□□ -0.02
CWC25-204ENST00000619299 TSHZ3Q63HK5 1081 aa14.93□□□□□ -0.02
CWC25-204ENST00000619299 LDHAL6AQ6ZMR3 332 aa14.93□□□□□ -0.02
CWC25-204ENST00000619299 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
CWC25-204ENST00000619299 SNAP23O00161 211 aa14.92□□□□□ -0.02
CWC25-204ENST00000619299 HELBQ8NG08 1087 aaPredicted RBP14.92□□□□□ -0.02
CWC25-204ENST00000619299 EAF2Q96CJ1 260 aaPredicted RBP14.92□□□□□ -0.02
CWC25-204ENST00000619299 KIF1BPQ96EK5 621 aa14.92□□□□□ -0.02
CWC25-204ENST00000619299 RTL9Q8NET4 1388 aa14.92□□□□□ -0.02
CWC25-204ENST00000619299 CRY2Q49AN0 593 aa14.91□□□□□ -0.02
CWC25-204ENST00000619299 PLEKHM2Q8IWE5 1019 aa14.91□□□□□ -0.02
CWC25-204ENST00000619299 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
CWC25-204ENST00000619299 TLR7Q9NYK1 1049 aaKnown RBP14.91□□□□□ -0.02
CWC25-204ENST00000619299 SALL3Q9BXA9 1300 aa14.91□□□□□ -0.02
CWC25-204ENST00000619299 KLRG2A4D1S0 409 aaPredicted RBP14.91□□□□□ -0.02
CWC25-204ENST00000619299 HSP90B1P14625 803 aaKnown RBP14.91□□□□□ -0.02
CWC25-204ENST00000619299 HSP90AB4PQ58FF6 505 aa14.91□□□□□ -0.02
CWC25-204ENST00000619299 BRIP1Q9BX63 1249 aa14.91□□□□□ -0.02
CWC25-204ENST00000619299 CCDC8Q9H0W5 538 aaPredicted RBP14.91□□□□□ -0.02
CWC25-204ENST00000619299 RIC1Q4ADV7 1423 aa14.9□□□□□ -0.02
CWC25-204ENST00000619299 CIAO1O76071 339 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms