RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
SEM1-220ENST00000619259 NDFIP2Q9NV92 336 aa6.99□□□□□ -1.29
SEM1-220ENST00000619259 P4HBP07237 508 aaKnown RBP6.98□□□□□ -1.29
SEM1-220ENST00000619259 RARAP10276 462 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 CTBSQ01459 385 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 ORC1Q13415 861 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 PDE12Q6L8Q7 609 aaKnown RBP6.98□□□□□ -1.29
SEM1-220ENST00000619259 NLRP13Q86W25 1043 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 GSX2Q9BZM3 304 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 TMEM63CQ9P1W3 806 aa6.98□□□□□ -1.29
SEM1-220ENST00000619259 FOXD3Q9UJU5 478 aaPredicted RBP6.98□□□□□ -1.29
SEM1-220ENST00000619259 PHACTR2O75167 634 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 TNFRSF21O75509 655 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 BMP4P12644 408 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 NFKB1P19838 968 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 MX2P20592 715 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 DSC3Q14574 896 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 ZNF326Q5BKZ1 582 aaKnown RBP6.97□□□□□ -1.29
SEM1-220ENST00000619259 SLC16A10Q8TF71 515 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 NANOS1Q8WY41 292 aaKnown RBP6.97□□□□□ -1.29
SEM1-220ENST00000619259 SLC30A3Q99726 388 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 ABI2Q9NYB9 513 aaPredicted RBP6.97□□□□□ -1.29
SEM1-220ENST00000619259 AMOTL2Q9Y2J4 779 aa6.97□□□□□ -1.29
SEM1-220ENST00000619259 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.97□□□□□ -1.29
SEM1-220ENST00000619259 SMARCA2P51531 1590 aa6.96□□□□□ -1.29
SEM1-220ENST00000619259 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 EGFRP00533 1210 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 LDHBP07195 334 aaKnown RBP6.96□□□□□ -1.3
SEM1-220ENST00000619259 TBC1D8BQ0IIM8 1120 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 XKR5Q6UX68 686 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 NPM2Q86SE8 214 aaKnown RBP6.96□□□□□ -1.3
SEM1-220ENST00000619259 SNX29Q8TEQ0 813 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 ZNF428Q96B54 188 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 ALKBH8Q96BT7 664 aaKnown RBP6.96□□□□□ -1.3
SEM1-220ENST00000619259 C11orf16Q9NQ32 467 aa6.96□□□□□ -1.3
SEM1-220ENST00000619259 PHF20L1A8MW92 1017 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 H3BM21 787 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 CPNE3O75131 537 aaKnown RBP6.95□□□□□ -1.3
SEM1-220ENST00000619259 IGHA2P01877 340 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 CES1P23141 567 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 TAGLNQ01995 201 aaKnown RBP6.95□□□□□ -1.3
SEM1-220ENST00000619259 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
SEM1-220ENST00000619259 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 CSRNP1Q96S65 589 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 HCN2Q9UL51 889 aa6.95□□□□□ -1.3
SEM1-220ENST00000619259 CCDC88BA6NC98 1476 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
SEM1-220ENST00000619259 TERTO14746 1132 aaKnown RBP6.94□□□□□ -1.3
SEM1-220ENST00000619259 MMP20O60882 483 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 PSAPP07602 524 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 GPR161Q8N6U8 529 aaKnown RBP6.94□□□□□ -1.3
SEM1-220ENST00000619259 ZFYVE28Q9HCC9 887 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 CNTN3Q9P232 1028 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 WWC3Q9ULE0 1092 aa6.94□□□□□ -1.3
SEM1-220ENST00000619259 NSFL1CQ9UNZ2 370 aaKnown RBP6.94□□□□□ -1.3
SEM1-220ENST00000619259 ATAD2BQ9ULI0 1458 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 POLR3DP05423 398 aaPredicted RBP6.93□□□□□ -1.3
SEM1-220ENST00000619259 ZNF16P17020 682 aaPredicted RBP6.93□□□□□ -1.3
SEM1-220ENST00000619259 PCBP4P57723 403 aaKnown RBP6.93□□□□□ -1.3
SEM1-220ENST00000619259 FGD1P98174 961 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
SEM1-220ENST00000619259 FAM182BQ5T319 152 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 SYT9Q86SS6 491 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 PMEPA1Q969W9 287 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 DNAJC25Q9H1X3 360 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 ZFATQ9P243 1243 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
SEM1-220ENST00000619259 RBM47A0AV96 593 aaKnown RBP6.92□□□□□ -1.3
SEM1-220ENST00000619259 EREGO14944 169 aa6.92□□□□□ -1.3
SEM1-220ENST00000619259 CYP2E1P05181 493 aaPredicted RBP6.92□□□□□ -1.3
SEM1-220ENST00000619259 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
SEM1-220ENST00000619259 ALG1LQ6GMV1 187 aa6.92□□□□□ -1.3
SEM1-220ENST00000619259 FBXO33Q7Z6M2 555 aa6.92□□□□□ -1.3
SEM1-220ENST00000619259 IRF7Q92985 503 aa6.92□□□□□ -1.3
SEM1-220ENST00000619259 SETDB2Q96T68 719 aa6.92□□□□□ -1.3
SEM1-220ENST00000619259 COL25A1Q9BXS0 654 aaPredicted RBP6.92□□□□□ -1.3
SEM1-220ENST00000619259 UBE2OQ9C0C9 1292 aaKnown RBP6.92□□□□□ -1.3
SEM1-220ENST00000619259 EFCC1Q9HA90 598 aa6.92□□□□□ -1.3
SEM1-220ENST00000619259 C2CD2LO14523 706 aa6.91□□□□□ -1.3
SEM1-220ENST00000619259 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
SEM1-220ENST00000619259 PLAURQ03405 335 aa6.91□□□□□ -1.3
SEM1-220ENST00000619259 GAS6Q14393 721 aa6.91□□□□□ -1.3
SEM1-220ENST00000619259 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
SEM1-220ENST00000619259 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
SEM1-220ENST00000619259 NSUN5Q96P11 429 aaKnown RBP6.91□□□□□ -1.3
SEM1-220ENST00000619259 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
SEM1-220ENST00000619259 MBIPQ9NS73 344 aa6.91□□□□□ -1.3
SEM1-220ENST00000619259 NLRP2Q9NX02 1062 aa6.91□□□□□ -1.3
SEM1-220ENST00000619259 TLR7Q9NYK1 1049 aaKnown RBP6.91□□□□□ -1.3
SEM1-220ENST00000619259 GADD45BO75293 160 aaPredicted RBP6.9□□□□□ -1.3
SEM1-220ENST00000619259 PRPF40AO75400 957 aaKnown RBP6.9□□□□□ -1.3
SEM1-220ENST00000619259 ZNF468Q5VIY5 522 aaPredicted RBP6.9□□□□□ -1.3
SEM1-220ENST00000619259 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
SEM1-220ENST00000619259 OR13H1Q8NG92 308 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms