RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 LMOD3Q0VAK6 560 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 GLMNQ92990 594 aa8.62□□□□□ -1.03
CBWD3-214ENST00000618921 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
CBWD3-214ENST00000618921 KIF13BQ9NQT8 1826 aa8.62□□□□□ -1.03
CBWD3-214ENST00000618921 CARNS1A5YM72 827 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 HSPA1AP0DMV8 641 aaKnown RBP8.61□□□□□ -1.03
CBWD3-214ENST00000618921 HSPA1BP0DMV9 641 aaKnown RBP8.61□□□□□ -1.03
CBWD3-214ENST00000618921 GNAI1P63096 354 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 TBC1D32Q96NH3 1257 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 MAP2P11137 1827 aaKnown RBP8.61□□□□□ -1.03
CBWD3-214ENST00000618921 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
CBWD3-214ENST00000618921 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 GDPD2Q9HCC8 539 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 RNF181Q9P0P0 153 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 PIM2Q9P1W9 311 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 KCPQ6ZWJ8 1503 aa8.61□□□□□ -1.03
CBWD3-214ENST00000618921 MAFGO15525 162 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 SEC24BO95487 1268 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 GYS1P13807 737 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 NCLP19338 710 aaKnown RBP8.6□□□□□ -1.03
CBWD3-214ENST00000618921 IL13P35225 146 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 EXOC8Q8IYI6 725 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 TMEM57Q8N5G2 664 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 SMC1BQ8NDV3 1235 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 ZBTB40Q9NUA8 1239 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 TMOD3Q9NYL9 352 aa8.6□□□□□ -1.03
CBWD3-214ENST00000618921 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-214ENST00000618921 NAP1L2Q9ULW6 460 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-214ENST00000618921 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
CBWD3-214ENST00000618921 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.59□□□□□ -1.03
CBWD3-214ENST00000618921 SETQ01105 290 aaPredicted RBP8.59□□□□□ -1.03
CBWD3-214ENST00000618921 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 PARP3Q9Y6F1 533 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 RTL1A6NKG5 1358 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 C10orf71Q711Q0 1435 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 PLEKHG2Q9H7P9 1386 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 DALRD3Q5D0E6 543 aaKnown RBP8.59□□□□□ -1.03
CBWD3-214ENST00000618921 SLC4A9Q96Q91 983 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
CBWD3-214ENST00000618921 POM121CA8CG34 1229 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 RFX1P22670 979 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 RFC4P35249 363 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
CBWD3-214ENST00000618921 SBF1O95248 1867 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 BRCA1P38398 1863 aaKnown RBP8.58□□□□□ -1.04
CBWD3-214ENST00000618921 ZNF853P0CG23 659 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
CBWD3-214ENST00000618921 MRPL50Q8N5N7 158 aaKnown RBP8.58□□□□□ -1.04
CBWD3-214ENST00000618921 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
CBWD3-214ENST00000618921 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
CBWD3-214ENST00000618921 VAMP4O75379 141 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 RPS6KA4O75676 772 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 HMOX1P09601 288 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 VEGFAP15692 232 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-214ENST00000618921 CHRNA5P30532 468 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 NUCB1Q02818 461 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 NOL8Q76FK4 1167 aaKnown RBP8.57□□□□□ -1.04
CBWD3-214ENST00000618921 GCC1Q96CN9 775 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 PLCD4Q9BRC7 762 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
CBWD3-214ENST00000618921 ARFGEF1Q9Y6D6 1849 aa8.57□□□□□ -1.04
CBWD3-214ENST00000618921 KIF24Q5T7B8 1368 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 C22orf23Q9BZE7 217 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 API5Q9BZZ5 524 aaKnown RBP8.56□□□□□ -1.04
CBWD3-214ENST00000618921 GPHNQ9NQX3 736 aaPredicted RBP8.56□□□□□ -1.04
CBWD3-214ENST00000618921 GLTPD2A6NH11 291 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 TBC1D12O60347 775 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 FRAT2O75474 233 aaPredicted RBP8.56□□□□□ -1.04
CBWD3-214ENST00000618921 SLC34A2O95436 690 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 PHKG2P15735 406 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 ABL2P42684 1182 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 IFNL2Q8IZJ0 200 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 EYA1Q99502 592 aa8.56□□□□□ -1.04
CBWD3-214ENST00000618921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
CBWD3-214ENST00000618921 FLT4P35916 1363 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
CBWD3-214ENST00000618921 MARCH6O60337 910 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 CLCN1P35523 988 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 RFC5P40937 340 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 MBIPQ9NS73 344 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
CBWD3-214ENST00000618921 C4AP0C0L4 1744 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 ABCC4O15439 1325 aa8.55□□□□□ -1.04
CBWD3-214ENST00000618921 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 POTECB2RU33 542 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
CBWD3-214ENST00000618921 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
CBWD3-214ENST00000618921 RASSF7Q02833 373 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms