RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 ERCC5P28715 1186 aaPredicted RBP16.5■□□□□ 0.23
PTPN9-206ENST00000618819 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
PTPN9-206ENST00000618819 KIF1BPQ96EK5 621 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 A0A087WZG4 1122 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 VCX3BQ9H321 246 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 GBP1P32455 592 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 GOLIM4O00461 696 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 IFIT1P09914 478 aaKnown RBP16.5■□□□□ 0.23
PTPN9-206ENST00000618819 PLCB3Q01970 1234 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
PTPN9-206ENST00000618819 BICD1Q96G01 975 aa16.49■□□□□ 0.23
PTPN9-206ENST00000618819 TXNDC9O14530 226 aa16.49■□□□□ 0.23
PTPN9-206ENST00000618819 SATB1Q01826 763 aa16.49■□□□□ 0.23
PTPN9-206ENST00000618819 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
PTPN9-206ENST00000618819 SYKP43405 635 aa16.49■□□□□ 0.23
PTPN9-206ENST00000618819 ZNF530Q6P9A1 599 aaPredicted RBP16.49■□□□□ 0.23
PTPN9-206ENST00000618819 ZC3H6P61129 1189 aaKnown RBP16.49■□□□□ 0.23
PTPN9-206ENST00000618819 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
PTPN9-206ENST00000618819 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
PTPN9-206ENST00000618819 GKAP1Q5VSY0 366 aaPredicted RBP16.49■□□□□ 0.23
PTPN9-206ENST00000618819 CCDC110Q8TBZ0 833 aa16.49■□□□□ 0.23
PTPN9-206ENST00000618819 AFAP1L1Q8TED9 768 aa16.49■□□□□ 0.23
PTPN9-206ENST00000618819 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
PTPN9-206ENST00000618819 INPP5BP32019 993 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 HDXQ7Z353 690 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 UBA7P41226 1012 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 MRRFQ96E11 262 aaKnown RBP16.48■□□□□ 0.23
PTPN9-206ENST00000618819 WDR70Q9NW82 654 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 NBPF8Q3BBV2 869 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 SAMM50Q9Y512 469 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 ARHGEF2Q92974 986 aaKnown RBP16.48■□□□□ 0.23
PTPN9-206ENST00000618819 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
PTPN9-206ENST00000618819 RNF168Q8IYW5 571 aaPredicted RBP16.47■□□□□ 0.23
PTPN9-206ENST00000618819 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
PTPN9-206ENST00000618819 GMNNO75496 209 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 CATIPQ7Z7H3 387 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 ZNF287Q9HBT7 754 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 ZNF131P52739 623 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 HSPA1LP34931 641 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
PTPN9-206ENST00000618819 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
PTPN9-206ENST00000618819 PPP1R7Q15435 360 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 LRRC43Q8N309 656 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 PFDN4Q9NQP4 134 aa16.47■□□□□ 0.23
PTPN9-206ENST00000618819 IFT74Q96LB3 600 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 CTAGE1Q96RT6 745 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 TCHPQ9BT92 498 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 CCDC172P0C7W6 258 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 NDUFAB1O14561 156 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
PTPN9-206ENST00000618819 HAND2P61296 217 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
PTPN9-206ENST00000618819 KIF5AQ12840 1032 aa16.46■□□□□ 0.22
PTPN9-206ENST00000618819 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.22
PTPN9-206ENST00000618819 DPH6Q7L8W6 267 aa16.46■□□□□ 0.22
PTPN9-206ENST00000618819 NECAB1Q8N987 351 aa16.46■□□□□ 0.22
PTPN9-206ENST00000618819 NUF2Q9BZD4 464 aa16.46■□□□□ 0.22
PTPN9-206ENST00000618819 TXNDC16Q9P2K2 825 aa16.46■□□□□ 0.22
PTPN9-206ENST00000618819 ORC3Q9UBD5 711 aaPredicted RBP16.46■□□□□ 0.22
PTPN9-206ENST00000618819 GSDMBQ8TAX9 411 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 B4GALNT4Q76KP1 1039 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 LMOD1P29536 600 aaPredicted RBP16.45■□□□□ 0.22
PTPN9-206ENST00000618819 VAV2P52735 878 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
PTPN9-206ENST00000618819 FCHSD2O94868 740 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 GCKP35557 465 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 CEP128Q6ZU80 1094 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 TBC1D9Q6ZT07 1266 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 STXBP4Q6ZWJ1 553 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
PTPN9-206ENST00000618819 ARFGAP2Q8N6H7 521 aa16.45■□□□□ 0.22
PTPN9-206ENST00000618819 TMEM67Q5HYA8 995 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
PTPN9-206ENST00000618819 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
PTPN9-206ENST00000618819 TSNAXIP1Q2TAA8 658 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 KRT86O43790 486 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 PPP2R3AQ06190 1150 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 TACO1Q9BSH4 297 aaKnown RBP16.44■□□□□ 0.22
PTPN9-206ENST00000618819 TBCAO75347 108 aaKnown RBP16.44■□□□□ 0.22
PTPN9-206ENST00000618819 STAT6P42226 847 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 MAP2K2P36507 400 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 RMND1Q9NWS8 449 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms