RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CNTROBQ8N137 903 aa30.73■■■□□ 2.51
VEGFC-202ENST00000618562 FOXD4L1Q9NU39 408 aa30.73■■■□□ 2.51
VEGFC-202ENST00000618562 GOLGA6L3A6NEY3 463 aa30.72■■■□□ 2.51
VEGFC-202ENST00000618562 TNNI3KQ59H18 835 aa30.72■■■□□ 2.51
VEGFC-202ENST00000618562 FPGT-TNNI3KV9GXZ4 949 aa30.72■■■□□ 2.51
VEGFC-202ENST00000618562 CAMTA2O94983 1202 aa30.72■■■□□ 2.51
VEGFC-202ENST00000618562 MYH3P11055 1940 aa30.71■■■□□ 2.51
VEGFC-202ENST00000618562 KCNQ4P56696 695 aa30.71■■■□□ 2.51
VEGFC-202ENST00000618562 SKOR2Q2VWA4 1001 aaPredicted RBP30.71■■■□□ 2.51
VEGFC-202ENST00000618562 ZNF594Q96JF6 807 aaPredicted RBP30.71■■■□□ 2.51
VEGFC-202ENST00000618562 CSF1RP07333 972 aa30.7■■■□□ 2.51
VEGFC-202ENST00000618562 SEPT12Q8IYM1 358 aa30.7■■■□□ 2.5
VEGFC-202ENST00000618562 TRMT112Q9UI30 125 aaKnown RBP30.69■■■□□ 2.5
VEGFC-202ENST00000618562 GZF1Q9H116 711 aaPredicted RBP30.69■■■□□ 2.5
VEGFC-202ENST00000618562 ISY1Q9ULR0 285 aaKnown RBP30.69■■■□□ 2.5
VEGFC-202ENST00000618562 BCORQ6W2J9 1755 aa30.68■■■□□ 2.5
VEGFC-202ENST00000618562 EYA2O00167 538 aa30.68■■■□□ 2.5
VEGFC-202ENST00000618562 DBNLQ9UJU6 430 aaKnown RBP30.68■■■□□ 2.5
VEGFC-202ENST00000618562 CCDC57Q2TAC2 916 aa30.67■■■□□ 2.5
VEGFC-202ENST00000618562 LRRC24Q50LG9 513 aa30.67■■■□□ 2.5
VEGFC-202ENST00000618562 CWC22Q9HCG8 908 aaKnown RBP30.67■■■□□ 2.5
VEGFC-202ENST00000618562 CIAO1O76071 339 aa30.67■■■□□ 2.5
VEGFC-202ENST00000618562 IL15P40933 162 aaPredicted RBP30.67■■■□□ 2.5
VEGFC-202ENST00000618562 NUCB2P80303 420 aa30.67■■■□□ 2.5
VEGFC-202ENST00000618562 QTRT2Q9H974 415 aaKnown RBP30.67■■■□□ 2.5
VEGFC-202ENST00000618562 IRS4O14654 1257 aaPredicted RBP30.66■■■□□ 2.5
VEGFC-202ENST00000618562 CCDC85AQ96PX6 553 aaPredicted RBP30.66■■■□□ 2.5
VEGFC-202ENST00000618562 IL25Q9H293 177 aa30.66■■■□□ 2.5
VEGFC-202ENST00000618562 CNTNAP4Q9C0A0 1308 aa30.66■■■□□ 2.5
VEGFC-202ENST00000618562 SSFA2P28290 1259 aa30.66■■■□□ 2.5
VEGFC-202ENST00000618562 TTLL11Q8NHH1 800 aa30.65■■■□□ 2.5
VEGFC-202ENST00000618562 PUS3Q9BZE2 481 aaKnown RBP30.65■■■□□ 2.5
VEGFC-202ENST00000618562 LY75O60449 1722 aa30.65■■■□□ 2.5
VEGFC-202ENST00000618562 GOLGA6L22H0YM25 854 aa30.64■■■□□ 2.5
VEGFC-202ENST00000618562 MCCP23508 829 aa30.64■■■□□ 2.5
VEGFC-202ENST00000618562 EPB41L2O43491 1005 aaKnown RBP30.64■■■□□ 2.5
VEGFC-202ENST00000618562 CTSWP56202 376 aa30.64■■■□□ 2.5
VEGFC-202ENST00000618562 SUSD4Q5VX71 490 aa30.64■■■□□ 2.5
VEGFC-202ENST00000618562 ANAPC15P60006 121 aa30.63■■■□□ 2.49
VEGFC-202ENST00000618562 EVI5LQ96CN4 794 aa30.63■■■□□ 2.49
VEGFC-202ENST00000618562 DBNDD2Q9BQY9 259 aa30.62■■■□□ 2.49
VEGFC-202ENST00000618562 BOLA2Q9H3K6 86 aa30.62■■■□□ 2.49
VEGFC-202ENST00000618562 GPR108Q9NPR9 543 aa30.62■■■□□ 2.49
VEGFC-202ENST00000618562 IFIT5Q13325 482 aaKnown RBP30.62■■■□□ 2.49
VEGFC-202ENST00000618562 IL17RAQ96F46 866 aa30.61■■■□□ 2.49
VEGFC-202ENST00000618562 GREM2Q9H772 168 aa30.61■■■□□ 2.49
VEGFC-202ENST00000618562 FBXO3Q9UK99 471 aa30.61■■■□□ 2.49
VEGFC-202ENST00000618562 PDE8AO60658 829 aa30.61■■■□□ 2.49
VEGFC-202ENST00000618562 CYP2E1P05181 493 aaPredicted RBP30.61■■■□□ 2.49
VEGFC-202ENST00000618562 TAF1LQ8IZX4 1826 aa30.6■■■□□ 2.49
VEGFC-202ENST00000618562 ATP5JP18859 108 aa30.6■■■□□ 2.49
VEGFC-202ENST00000618562 MCM2P49736 904 aa30.6■■■□□ 2.49
VEGFC-202ENST00000618562 ANO2Q9NQ90 1003 aa30.6■■■□□ 2.49
VEGFC-202ENST00000618562 ZNF609O15014 1411 aa30.6■■■□□ 2.49
VEGFC-202ENST00000618562 XRCC6P12956 609 aaKnown RBP eCLIP30.59■■■□□ 2.49
VEGFC-202ENST00000618562 PARP10Q53GL7 1025 aa30.59■■■□□ 2.49
VEGFC-202ENST00000618562 RTN4Q9NQC3 1192 aaKnown RBP30.59■■■□□ 2.49
VEGFC-202ENST00000618562 SGSM2O43147 1006 aa30.59■■■□□ 2.49
VEGFC-202ENST00000618562 MRE11P49959 708 aa30.59■■■□□ 2.49
VEGFC-202ENST00000618562 RC3H1Q5TC82 1133 aaKnown RBP30.59■■■□□ 2.49
VEGFC-202ENST00000618562 CCNL1Q9UK58 526 aaPredicted RBP30.59■■■□□ 2.49
VEGFC-202ENST00000618562 BAG4O95429 457 aaKnown RBP30.58■■■□□ 2.49
VEGFC-202ENST00000618562 ITGA6P23229 1130 aa30.58■■■□□ 2.49
VEGFC-202ENST00000618562 UTP14AQ9BVJ6 771 aaKnown RBP30.58■■■□□ 2.49
VEGFC-202ENST00000618562 NIP7Q9Y221 180 aaKnown RBP eCLIP30.58■■■□□ 2.49
VEGFC-202ENST00000618562 SH3TC1Q8TE82 1336 aa30.58■■■□□ 2.49
VEGFC-202ENST00000618562 DDX60Q8IY21 1712 aaKnown RBP30.57■■■□□ 2.49
VEGFC-202ENST00000618562 BRWD3Q6RI45 1802 aa30.57■■■□□ 2.48
VEGFC-202ENST00000618562 SCN7AQ01118 1682 aa30.57■■■□□ 2.48
VEGFC-202ENST00000618562 TAF7LQ5H9L4 462 aa30.57■■■□□ 2.48
VEGFC-202ENST00000618562 FAM177BA6PVY3 158 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 TIMM10P62072 90 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 CWC27Q6UX04 472 aaKnown RBP30.56■■■□□ 2.48
VEGFC-202ENST00000618562 AK7Q96M32 723 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 ZNF652Q9Y2D9 606 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 CLEC4GQ6UXB4 293 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 SMIM5Q71RC9 77 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 DIAPH3Q9NSV4 1193 aa30.56■■■□□ 2.48
VEGFC-202ENST00000618562 NTSR2O95665 410 aa30.55■■■□□ 2.48
VEGFC-202ENST00000618562 NEUROD6Q96NK8 337 aa30.55■■■□□ 2.48
VEGFC-202ENST00000618562 CEP126Q9P2H0 1117 aa30.55■■■□□ 2.48
VEGFC-202ENST00000618562 LAMB2P55268 1798 aa30.55■■■□□ 2.48
VEGFC-202ENST00000618562 ANKRD18BA2A2Z9 1011 aa30.54■■■□□ 2.48
VEGFC-202ENST00000618562 RPS6KA4O75676 772 aa30.54■■■□□ 2.48
VEGFC-202ENST00000618562 HCLS1P14317 486 aaPredicted RBP30.54■■■□□ 2.48
VEGFC-202ENST00000618562 NEK4P51957 841 aa30.54■■■□□ 2.48
VEGFC-202ENST00000618562 A0A1B0GUL7 405 aa30.53■■■□□ 2.48
VEGFC-202ENST00000618562 RIC1Q4ADV7 1423 aa30.53■■■□□ 2.48
VEGFC-202ENST00000618562 FAM43AQ8N2R8 423 aa30.53■■■□□ 2.48
VEGFC-202ENST00000618562 EDC3Q96F86 508 aaKnown RBP30.53■■■□□ 2.48
VEGFC-202ENST00000618562 BCL11BQ9C0K0 894 aaPredicted RBP30.53■■■□□ 2.48
VEGFC-202ENST00000618562 RIPOR2Q9Y4F9 1068 aa30.53■■■□□ 2.48
VEGFC-202ENST00000618562 EP400Q96L91 3159 aa30.52■■■□□ 2.48
VEGFC-202ENST00000618562 LRP5O75197 1615 aa30.51■■■□□ 2.47
VEGFC-202ENST00000618562 GNPATO15228 680 aa30.51■■■□□ 2.47
VEGFC-202ENST00000618562 LDHAL6AQ6ZMR3 332 aa30.51■■■□□ 2.47
VEGFC-202ENST00000618562 RUFY2Q8WXA3 655 aa30.51■■■□□ 2.47
VEGFC-202ENST00000618562 HAUS7Q99871 368 aa30.51■■■□□ 2.47
VEGFC-202ENST00000618562 FSD1Q9BTV5 496 aa30.51■■■□□ 2.47
VEGFC-202ENST00000618562 KLHL40Q2TBA0 621 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms