RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PDZRN3Q9UPQ7 1066 aa28.47■■■□□ 2.15
CBWD3-213ENST00000618217 HDAC5Q9UQL6 1122 aa28.47■■■□□ 2.15
CBWD3-213ENST00000618217 KCNA3P22001 575 aa28.46■■■□□ 2.15
CBWD3-213ENST00000618217 CHRNA5P30532 468 aa28.46■■■□□ 2.15
CBWD3-213ENST00000618217 C2CD5Q86YS7 1000 aa28.46■■■□□ 2.15
CBWD3-213ENST00000618217 GNAI2P04899 355 aa28.45■■■□□ 2.14
CBWD3-213ENST00000618217 HOXA10P31260 410 aaPredicted RBP28.45■■■□□ 2.14
CBWD3-213ENST00000618217 KLHL34Q8N239 644 aa28.45■■■□□ 2.14
CBWD3-213ENST00000618217 A0A0G2JLW4 131 aa28.44■■■□□ 2.14
CBWD3-213ENST00000618217 H0YIN7 160 aa28.44■■■□□ 2.14
CBWD3-213ENST00000618217 DPEP1P16444 411 aa28.44■■■□□ 2.14
CBWD3-213ENST00000618217 LMBR1LQ6UX01 489 aa28.44■■■□□ 2.14
CBWD3-213ENST00000618217 SYT17Q9BSW7 474 aa28.44■■■□□ 2.14
CBWD3-213ENST00000618217 TAF1P21675 1872 aa28.44■■■□□ 2.14
CBWD3-213ENST00000618217 NLGN2Q8NFZ4 835 aa28.43■■■□□ 2.14
CBWD3-213ENST00000618217 CHMP4BQ9H444 224 aaKnown RBP28.43■■■□□ 2.14
CBWD3-213ENST00000618217 BRCA1P38398 1863 aaKnown RBP28.43■■■□□ 2.14
CBWD3-213ENST00000618217 RTL9Q8NET4 1388 aa28.43■■■□□ 2.14
CBWD3-213ENST00000618217 CCDC152Q4G0S7 254 aa28.42■■■□□ 2.14
CBWD3-213ENST00000618217 MASTLQ96GX5 879 aa28.42■■■□□ 2.14
CBWD3-213ENST00000618217 NPR1P16066 1061 aa28.41■■■□□ 2.14
CBWD3-213ENST00000618217 IRX6P78412 446 aaPredicted RBP28.41■■■□□ 2.14
CBWD3-213ENST00000618217 GREM2Q9H772 168 aa28.41■■■□□ 2.14
CBWD3-213ENST00000618217 C1orf115Q9H7X2 142 aa28.41■■■□□ 2.14
CBWD3-213ENST00000618217 COL4A1P02462 1669 aa28.41■■■□□ 2.14
CBWD3-213ENST00000618217 STYK1Q6J9G0 422 aa28.4■■■□□ 2.14
CBWD3-213ENST00000618217 CCDC85AQ96PX6 553 aaPredicted RBP28.4■■■□□ 2.14
CBWD3-213ENST00000618217 EXOC6Q8TAG9 804 aa28.4■■■□□ 2.14
CBWD3-213ENST00000618217 RPGRQ92834 1020 aaKnown RBP28.4■■■□□ 2.14
CBWD3-213ENST00000618217 CRAMP1Q96RY5 1269 aa28.4■■■□□ 2.14
CBWD3-213ENST00000618217 MTX1Q13505 466 aa28.39■■■□□ 2.13
CBWD3-213ENST00000618217 FAM161AQ3B820 660 aa28.39■■■□□ 2.13
CBWD3-213ENST00000618217 SEC31BQ9NQW1 1179 aa28.38■■■□□ 2.13
CBWD3-213ENST00000618217 RBM17Q96I25 401 aaKnown RBP28.37■■■□□ 2.13
CBWD3-213ENST00000618217 DDX46Q7L014 1031 aaKnown RBP28.36■■■□□ 2.13
CBWD3-213ENST00000618217 ZNF622Q969S3 477 aaKnown RBP eCLIP28.36■■■□□ 2.13
CBWD3-213ENST00000618217 SLX4Q8IY92 1834 aa28.36■■■□□ 2.13
CBWD3-213ENST00000618217 ITGA6P23229 1130 aa28.36■■■□□ 2.13
CBWD3-213ENST00000618217 CACNA1SQ13698 1873 aa28.35■■■□□ 2.13
CBWD3-213ENST00000618217 ALDH1B1P30837 517 aa28.34■■■□□ 2.13
CBWD3-213ENST00000618217 CEP85Q6P2H3 762 aa28.34■■■□□ 2.13
CBWD3-213ENST00000618217 CELF1Q92879 486 aaKnown RBP28.34■■■□□ 2.13
CBWD3-213ENST00000618217 CNKSR1Q969H4 720 aa28.34■■■□□ 2.13
CBWD3-213ENST00000618217 PIM2Q9P1W9 311 aa28.34■■■□□ 2.13
CBWD3-213ENST00000618217 CHMP3Q9Y3E7 222 aa28.34■■■□□ 2.13
CBWD3-213ENST00000618217 RFX5P48382 616 aaPredicted RBP28.33■■■□□ 2.13
CBWD3-213ENST00000618217 ATP8B2P98198 1209 aa28.33■■■□□ 2.13
CBWD3-213ENST00000618217 IFIT5Q13325 482 aaKnown RBP28.33■■■□□ 2.13
CBWD3-213ENST00000618217 GRAPQ13588 217 aa28.33■■■□□ 2.13
CBWD3-213ENST00000618217 AAMPQ13685 434 aa28.33■■■□□ 2.13
CBWD3-213ENST00000618217 GRAPLQ8TC17 118 aaPredicted RBP28.33■■■□□ 2.13
CBWD3-213ENST00000618217 PNMA6EA0A0J9YXQ4 647 aa28.32■■■□□ 2.12
CBWD3-213ENST00000618217 ANKRD18BA2A2Z9 1011 aa28.32■■■□□ 2.12
CBWD3-213ENST00000618217 RPS8P62241 208 aaKnown RBP28.32■■■□□ 2.12
CBWD3-213ENST00000618217 CCDC57Q2TAC2 916 aa28.32■■■□□ 2.12
CBWD3-213ENST00000618217 SIRT2Q8IXJ6 389 aa28.32■■■□□ 2.12
CBWD3-213ENST00000618217 TTLL6Q8N841 843 aa28.32■■■□□ 2.12
CBWD3-213ENST00000618217 SRGAP3O43295 1099 aa28.31■■■□□ 2.12
CBWD3-213ENST00000618217 SPEF2Q9C093 1822 aa28.3■■■□□ 2.12
CBWD3-213ENST00000618217 BBOX1O75936 387 aa28.3■■■□□ 2.12
CBWD3-213ENST00000618217 PRPF40BQ6NWY9 871 aaKnown RBP28.3■■■□□ 2.12
CBWD3-213ENST00000618217 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
CBWD3-213ENST00000618217 SSH3Q8TE77 659 aa28.3■■■□□ 2.12
CBWD3-213ENST00000618217 CDC5LQ99459 802 aaKnown RBP28.3■■■□□ 2.12
CBWD3-213ENST00000618217 PCDHB15Q9Y5E8 787 aa28.3■■■□□ 2.12
CBWD3-213ENST00000618217 POLA2Q14181 598 aa28.29■■■□□ 2.12
CBWD3-213ENST00000618217 C7orf43Q8WVR3 580 aa28.29■■■□□ 2.12
CBWD3-213ENST00000618217 ZNF594Q96JF6 807 aaPredicted RBP28.29■■■□□ 2.12
CBWD3-213ENST00000618217 PTPN12Q05209 780 aaKnown RBP28.28■■■□□ 2.12
CBWD3-213ENST00000618217 DALRD3Q5D0E6 543 aaKnown RBP28.28■■■□□ 2.12
CBWD3-213ENST00000618217 ANKRD18AQ8IVF6 992 aa28.28■■■□□ 2.12
CBWD3-213ENST00000618217 GOLGB1Q14789 3259 aaKnown RBP28.27■■■□□ 2.12
CBWD3-213ENST00000618217 KLHDC4Q8TBB5 520 aa28.27■■■□□ 2.12
CBWD3-213ENST00000618217 ARFGEF1Q9Y6D6 1849 aa28.27■■■□□ 2.12
CBWD3-213ENST00000618217 SLC51AQ86UW1 340 aa28.26■■■□□ 2.11
CBWD3-213ENST00000618217 WWC3Q9ULE0 1092 aa28.26■■■□□ 2.11
CBWD3-213ENST00000618217 LRRC37AA6NMS7 1700 aa28.25■■■□□ 2.11
CBWD3-213ENST00000618217 COPRSQ9NQ92 184 aa28.25■■■□□ 2.11
CBWD3-213ENST00000618217 BSDC1Q9NW68 430 aaPredicted RBP28.25■■■□□ 2.11
CBWD3-213ENST00000618217 PPEF1O14829 653 aaPredicted RBP28.25■■■□□ 2.11
CBWD3-213ENST00000618217 IGHMBP2P38935 993 aaKnown RBP28.24■■■□□ 2.11
CBWD3-213ENST00000618217 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
CBWD3-213ENST00000618217 ATP6V0A2Q9Y487 856 aa28.24■■■□□ 2.11
CBWD3-213ENST00000618217 SP8Q8IXZ3 490 aa28.23■■■□□ 2.11
CBWD3-213ENST00000618217 PA2G4Q9UQ80 394 aaKnown RBP28.23■■■□□ 2.11
CBWD3-213ENST00000618217 TAF7LQ5H9L4 462 aa28.22■■■□□ 2.11
CBWD3-213ENST00000618217 OLFM4Q6UX06 510 aa28.22■■■□□ 2.11
CBWD3-213ENST00000618217 LDHAL6AQ6ZMR3 332 aa28.22■■■□□ 2.11
CBWD3-213ENST00000618217 PUS3Q9BZE2 481 aaKnown RBP28.22■■■□□ 2.11
CBWD3-213ENST00000618217 BCS1LQ9Y276 419 aa28.22■■■□□ 2.11
CBWD3-213ENST00000618217 MPHOSPH8Q99549 860 aa28.21■■■□□ 2.11
CBWD3-213ENST00000618217 RIPOR2Q9Y4F9 1068 aa28.21■■■□□ 2.11
CBWD3-213ENST00000618217 SNED1Q8TER0 1413 aa28.21■■■□□ 2.11
CBWD3-213ENST00000618217 C21orf2O43822 256 aa28.21■■■□□ 2.11
CBWD3-213ENST00000618217 NEFLP07196 543 aa28.2■■■□□ 2.1
CBWD3-213ENST00000618217 LRRC24Q50LG9 513 aa28.2■■■□□ 2.1
CBWD3-213ENST00000618217 FBXO3Q9UK99 471 aa28.2■■■□□ 2.1
CBWD3-213ENST00000618217 MINPP1Q9UNW1 487 aa28.2■■■□□ 2.1
CBWD3-213ENST00000618217 EYA2O00167 538 aa28.19■■■□□ 2.1
CBWD3-213ENST00000618217 HMMRO75330 724 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms