RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 SUGP1Q8IWZ8 645 aaKnown RBP12.58□□□□□ -0.4
CPEB1-215ENST00000617958 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
CPEB1-215ENST00000617958 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
CPEB1-215ENST00000617958 CCP110O43303 1012 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 ACTN2P35609 894 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 IQCB1Q15051 598 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 SWT1Q5T5J6 900 aaKnown RBP12.57□□□□□ -0.4
CPEB1-215ENST00000617958 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 MSL3Q8N5Y2 521 aaKnown RBP12.57□□□□□ -0.4
CPEB1-215ENST00000617958 MSH6P52701 1360 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 EFCAB8A8MWE9 144 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 TRIM66O15016 1216 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 LIG1P18858 919 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 TTC31Q49AM3 519 aaPredicted RBP12.57□□□□□ -0.4
CPEB1-215ENST00000617958 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 UBXN4Q92575 508 aa12.57□□□□□ -0.4
CPEB1-215ENST00000617958 LOC102724159A0A0B4J2E5 919 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 GOLGA6L19H0YKK7 550 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 ATP2B1P20020 1258 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 OAS2P29728 719 aaKnown RBP12.56□□□□□ -0.4
CPEB1-215ENST00000617958 AK2P54819 239 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 ST5P78524 1137 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
CPEB1-215ENST00000617958 KRT28Q7Z3Y7 464 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 LCMT1Q9UIC8 334 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 MST1RQ04912 1400 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
CPEB1-215ENST00000617958 GJB2P29033 226 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 REXO1L1PQ8IX06 675 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
CPEB1-215ENST00000617958 CPP00450 1065 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 SMC1AQ14683 1233 aaKnown RBP12.55□□□□□ -0.4
CPEB1-215ENST00000617958 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
CPEB1-215ENST00000617958 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 CCDC150Q8NCX0 1101 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 MON2Q7Z3U7 1717 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
CPEB1-215ENST00000617958 CTAGE5O15320 804 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 TBC1D8O95759 1140 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 PDCP20941 246 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
CPEB1-215ENST00000617958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
CPEB1-215ENST00000617958 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
CPEB1-215ENST00000617958 TADA3O75528 432 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
CPEB1-215ENST00000617958 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
CPEB1-215ENST00000617958 MAP2P11137 1827 aaKnown RBP12.54□□□□□ -0.4
CPEB1-215ENST00000617958 GSCP56915 257 aaPredicted RBP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 DNAJC25Q9H1X3 360 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 BCCIPQ9P287 314 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 DNAI1Q9UI46 699 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 NRDCO43847 1150 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 KIF1CO43896 1103 aaKnown RBP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 APPP05067 770 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 CAMK4Q16566 473 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 E4F1Q66K89 784 aaPredicted RBP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 GPR161Q8N6U8 529 aaKnown RBP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 MKRN1Q9UHC7 482 aaKnown RBP12.53□□□□□ -0.4
CPEB1-215ENST00000617958 CEP83Q9Y592 693 aa12.53□□□□□ -0.4
CPEB1-215ENST00000617958 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 CCDC172P0C7W6 258 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.4
CPEB1-215ENST00000617958 STX1AQ16623 288 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 CADPS2Q86UW7 1296 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 TRMT1Q9NXH9 659 aaKnown RBP12.52□□□□□ -0.4
CPEB1-215ENST00000617958 ADAM21Q9UKJ8 722 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 PIK3C2AO00443 1686 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.4
CPEB1-215ENST00000617958 SGSM2O43147 1006 aa12.52□□□□□ -0.41
CPEB1-215ENST00000617958 GYS2P54840 703 aa12.52□□□□□ -0.41
CPEB1-215ENST00000617958 LRRFIP1Q32MZ4 808 aaKnown RBP12.52□□□□□ -0.41
CPEB1-215ENST00000617958 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.41
CPEB1-215ENST00000617958 ZBTB9Q96C00 473 aa12.52□□□□□ -0.41
CPEB1-215ENST00000617958 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
CPEB1-215ENST00000617958 MEIS3Q99687 375 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms