RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.45
PTPRT-210ENST00000617474 RUFY3Q7L099 469 aa17.83■□□□□ 0.45
PTPRT-210ENST00000617474 PALD1Q9ULE6 856 aa17.83■□□□□ 0.45
PTPRT-210ENST00000617474 SNX14Q9Y5W7 946 aa17.83■□□□□ 0.45
PTPRT-210ENST00000617474 ZNF521Q96K83 1311 aa17.83■□□□□ 0.45
PTPRT-210ENST00000617474 IL13P35225 146 aa17.83■□□□□ 0.44
PTPRT-210ENST00000617474 CCDC150Q8NCX0 1101 aa17.83■□□□□ 0.44
PTPRT-210ENST00000617474 NCOA7Q8NI08 942 aa17.83■□□□□ 0.44
PTPRT-210ENST00000617474 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
PTPRT-210ENST00000617474 CTDP1Q9Y5B0 961 aaPredicted RBP17.83■□□□□ 0.44
PTPRT-210ENST00000617474 SLU7O95391 586 aaKnown RBP17.83■□□□□ 0.44
PTPRT-210ENST00000617474 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.44
PTPRT-210ENST00000617474 USP5P45974 858 aa17.83■□□□□ 0.44
PTPRT-210ENST00000617474 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
PTPRT-210ENST00000617474 IFNKQ9P0W0 207 aa17.83■□□□□ 0.44
PTPRT-210ENST00000617474 CCDC196A0A1B0GTZ2 297 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 AFMP43652 599 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 MAP3K12Q12852 859 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 SYT10Q6XYQ8 523 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 GBP3Q9H0R5 595 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 KAT6BQ8WYB5 2073 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 ALG1Q9BT22 464 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 A0A1B0GVL5 298 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 IGHMBP2P38935 993 aaKnown RBP17.82■□□□□ 0.44
PTPRT-210ENST00000617474 MAP3K19Q56UN5 1328 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 TAX1BP1Q86VP1 789 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 LUC7LQ9NQ29 371 aaKnown RBP17.82■□□□□ 0.44
PTPRT-210ENST00000617474 KIAA0556O60303 1618 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 ANKRD24Q8TF21 1146 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
PTPRT-210ENST00000617474 PTPRTO14522 1441 aa17.81■□□□□ 0.44
PTPRT-210ENST00000617474 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
PTPRT-210ENST00000617474 STARD3NLO95772 234 aa17.81■□□□□ 0.44
PTPRT-210ENST00000617474 RXRAP19793 462 aa17.81■□□□□ 0.44
PTPRT-210ENST00000617474 NDUFB9Q9Y6M9 179 aa17.81■□□□□ 0.44
PTPRT-210ENST00000617474 CCDC129Q6ZRS4 1044 aa17.81■□□□□ 0.44
PTPRT-210ENST00000617474 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
PTPRT-210ENST00000617474 SEPT11Q9NVA2 429 aaKnown RBP17.8■□□□□ 0.44
PTPRT-210ENST00000617474 NBPF7P0C2Y1 421 aaPredicted RBP17.8■□□□□ 0.44
PTPRT-210ENST00000617474 SPA17Q15506 151 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
PTPRT-210ENST00000617474 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
PTPRT-210ENST00000617474 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 CHL1O00533 1208 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 SPTLC2O15270 562 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 MATR3P43243 847 aaKnown RBP eCLIP17.8■□□□□ 0.44
PTPRT-210ENST00000617474 NPATQ14207 1427 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 TTC41PQ6P2S7 1318 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 N4BP3O15049 544 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 SGSM2O43147 1006 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 GPT2Q8TD30 523 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 KCNG4Q8TDN1 519 aa17.8■□□□□ 0.44
PTPRT-210ENST00000617474 FSD2A1L4K1 749 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 BRD1O95696 1058 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 ALDH1L1O75891 902 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
PTPRT-210ENST00000617474 SHANK2Q9UPX8 1470 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 CCDC191Q8NCU4 936 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
PTPRT-210ENST00000617474 NLRP5P59047 1200 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 ARFGAP3Q9NP61 516 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 RIMS2Q9UQ26 1411 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 INSRP06213 1382 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
PTPRT-210ENST00000617474 IQCEQ6IPM2 695 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 GTF3C6Q969F1 213 aa17.78■□□□□ 0.44
PTPRT-210ENST00000617474 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
PTPRT-210ENST00000617474 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
PTPRT-210ENST00000617474 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
PTPRT-210ENST00000617474 SMARCC1Q92922 1105 aaPredicted RBP17.78■□□□□ 0.44
PTPRT-210ENST00000617474 OTUD7BQ6GQQ9 843 aa17.77■□□□□ 0.44
PTPRT-210ENST00000617474 BICC1Q9H694 974 aaKnown RBP17.77■□□□□ 0.44
PTPRT-210ENST00000617474 BMP2KQ9NSY1 1161 aaPredicted RBP17.77■□□□□ 0.44
PTPRT-210ENST00000617474 ZBTB43O43298 467 aa17.77■□□□□ 0.44
PTPRT-210ENST00000617474 PRC1O43663 620 aa17.77■□□□□ 0.44
PTPRT-210ENST00000617474 ADGRL2O95490 1459 aa17.77■□□□□ 0.44
PTPRT-210ENST00000617474 ANKRD18BA2A2Z9 1011 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 YEATS4O95619 227 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 STX17P56962 302 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 TFCP2Q12800 502 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 TDRD12Q587J7 1177 aaKnown RBP17.77■□□□□ 0.43
PTPRT-210ENST00000617474 CACNA2D4Q7Z3S7 1137 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 ZNF397Q8NF99 534 aaPredicted RBP17.77■□□□□ 0.43
PTPRT-210ENST00000617474 MYRIPQ8NFW9 859 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 TIGD1Q96MW7 591 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 CBX8Q9HC52 389 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 PRM3Q9NNZ6 103 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 FBXO3Q9UK99 471 aa17.77■□□□□ 0.43
PTPRT-210ENST00000617474 PHACTR2O75167 634 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 PPP1R9BQ96SB3 815 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 MYO6Q9UM54 1294 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 ADAMTS12P58397 1594 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms