RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 GRIPAP1Q4V328 841 aa26.8■■□□□ 1.88
PCDHA11-203ENST00000617408 DNAAF4Q8WXU2 420 aa26.8■■□□□ 1.88
PCDHA11-203ENST00000617408 NEURL1BA8MQ27 555 aa26.79■■□□□ 1.88
PCDHA11-203ENST00000617408 BBOX1O75936 387 aa26.79■■□□□ 1.88
PCDHA11-203ENST00000617408 C16orf71Q8IYS4 520 aaPredicted RBP26.79■■□□□ 1.88
PCDHA11-203ENST00000617408 LRRC37AA6NMS7 1700 aa26.79■■□□□ 1.88
PCDHA11-203ENST00000617408 COL4A1P02462 1669 aa26.78■■□□□ 1.88
PCDHA11-203ENST00000617408 WDR90Q96KV7 1748 aa26.77■■□□□ 1.88
PCDHA11-203ENST00000617408 CDHR2Q9BYE9 1310 aa26.77■■□□□ 1.88
PCDHA11-203ENST00000617408 PDE8AO60658 829 aa26.77■■□□□ 1.88
PCDHA11-203ENST00000617408 SLFN5Q08AF3 891 aa26.77■■□□□ 1.88
PCDHA11-203ENST00000617408 SP8Q8IXZ3 490 aa26.76■■□□□ 1.87
PCDHA11-203ENST00000617408 CELF1Q92879 486 aaKnown RBP26.76■■□□□ 1.87
PCDHA11-203ENST00000617408 CDCA7LQ96GN5 454 aa26.76■■□□□ 1.87
PCDHA11-203ENST00000617408 MYH3P11055 1940 aa26.75■■□□□ 1.87
PCDHA11-203ENST00000617408 TMC4Q7Z404 712 aa26.75■■□□□ 1.87
PCDHA11-203ENST00000617408 CCDC85AQ96PX6 553 aaPredicted RBP26.75■■□□□ 1.87
PCDHA11-203ENST00000617408 COL4A5P29400 1685 aa26.75■■□□□ 1.87
PCDHA11-203ENST00000617408 ZNF541Q9H0D2 1346 aa26.74■■□□□ 1.87
PCDHA11-203ENST00000617408 F6X3S4 739 aa26.74■■□□□ 1.87
PCDHA11-203ENST00000617408 TOMM70O94826 608 aa26.74■■□□□ 1.87
PCDHA11-203ENST00000617408 CCDC152Q4G0S7 254 aa26.74■■□□□ 1.87
PCDHA11-203ENST00000617408 DPP8Q6V1X1 898 aaPredicted RBP26.74■■□□□ 1.87
PCDHA11-203ENST00000617408 JDP2Q8WYK2 163 aa26.74■■□□□ 1.87
PCDHA11-203ENST00000617408 DDNO94850 711 aaPredicted RBP26.73■■□□□ 1.87
PCDHA11-203ENST00000617408 UBE3BQ7Z3V4 1068 aa26.73■■□□□ 1.87
PCDHA11-203ENST00000617408 LARGE2Q8N3Y3 721 aa26.73■■□□□ 1.87
PCDHA11-203ENST00000617408 LINS1Q8NG48 757 aa26.73■■□□□ 1.87
PCDHA11-203ENST00000617408 PPIP5K2O43314 1243 aa26.72■■□□□ 1.87
PCDHA11-203ENST00000617408 VEGFAP15692 232 aaPredicted RBP26.72■■□□□ 1.87
PCDHA11-203ENST00000617408 GCKRQ14397 625 aa26.72■■□□□ 1.87
PCDHA11-203ENST00000617408 MPNDQ8N594 471 aa26.72■■□□□ 1.87
PCDHA11-203ENST00000617408 SUPT20HQ8NEM7 779 aa26.72■■□□□ 1.87
PCDHA11-203ENST00000617408 SEC31BQ9NQW1 1179 aa26.72■■□□□ 1.87
PCDHA11-203ENST00000617408 CTSWP56202 376 aa26.71■■□□□ 1.87
PCDHA11-203ENST00000617408 AOC3Q16853 763 aa26.71■■□□□ 1.87
PCDHA11-203ENST00000617408 DUOX1Q9NRD9 1551 aa26.71■■□□□ 1.87
PCDHA11-203ENST00000617408 FZD9O00144 591 aa26.69■■□□□ 1.86
PCDHA11-203ENST00000617408 RPS8P62241 208 aaKnown RBP26.69■■□□□ 1.86
PCDHA11-203ENST00000617408 NIM1KQ8IY84 436 aa26.69■■□□□ 1.86
PCDHA11-203ENST00000617408 RBM46Q8TBY0 533 aaKnown RBP26.69■■□□□ 1.86
PCDHA11-203ENST00000617408 SPEF2Q9C093 1822 aa26.69■■□□□ 1.86
PCDHA11-203ENST00000617408 H7C1W4 665 aa26.68■■□□□ 1.86
PCDHA11-203ENST00000617408 SLC4A10Q6U841 1118 aa26.68■■□□□ 1.86
PCDHA11-203ENST00000617408 RTFDC1Q9BY42 306 aaPredicted RBP26.68■■□□□ 1.86
PCDHA11-203ENST00000617408 POTECB2RU33 542 aa26.67■■□□□ 1.86
PCDHA11-203ENST00000617408 BEND3Q5T5X7 828 aa26.67■■□□□ 1.86
PCDHA11-203ENST00000617408 MRPL50Q8N5N7 158 aaKnown RBP26.67■■□□□ 1.86
PCDHA11-203ENST00000617408 BCL2L13Q9BXK5 485 aa26.67■■□□□ 1.86
PCDHA11-203ENST00000617408 NSFL1CQ9UNZ2 370 aaKnown RBP26.67■■□□□ 1.86
PCDHA11-203ENST00000617408 LTBP1Q14766 1721 aa26.66■■□□□ 1.86
PCDHA11-203ENST00000617408 EIF6P56537 245 aaKnown RBP26.66■■□□□ 1.86
PCDHA11-203ENST00000617408 ANKRD18AQ8IVF6 992 aa26.65■■□□□ 1.86
PCDHA11-203ENST00000617408 TRMT2AQ8IZ69 625 aaKnown RBP26.65■■□□□ 1.86
PCDHA11-203ENST00000617408 TTLL11Q8NHH1 800 aa26.65■■□□□ 1.86
PCDHA11-203ENST00000617408 SSH1Q8WYL5 1049 aa26.65■■□□□ 1.86
PCDHA11-203ENST00000617408 VPS33BQ9H267 617 aa26.65■■□□□ 1.86
PCDHA11-203ENST00000617408 SCN4AP35499 1836 aa26.65■■□□□ 1.86
PCDHA11-203ENST00000617408 GPSM2P81274 684 aa26.64■■□□□ 1.86
PCDHA11-203ENST00000617408 L3MBTL3Q96JM7 780 aaPredicted RBP26.64■■□□□ 1.86
PCDHA11-203ENST00000617408 CDC5LQ99459 802 aaKnown RBP26.64■■□□□ 1.86
PCDHA11-203ENST00000617408 GREM2Q9H772 168 aa26.64■■□□□ 1.86
PCDHA11-203ENST00000617408 IQCA1LA6NCM1 817 aa26.63■■□□□ 1.85
PCDHA11-203ENST00000617408 HSPA6P17066 643 aa26.63■■□□□ 1.85
PCDHA11-203ENST00000617408 CASP7P55210 303 aa26.63■■□□□ 1.85
PCDHA11-203ENST00000617408 KIAA2012Q0VF49 1180 aa26.63■■□□□ 1.85
PCDHA11-203ENST00000617408 GPC2Q8N158 579 aa26.63■■□□□ 1.85
PCDHA11-203ENST00000617408 GJA3Q9Y6H8 435 aa26.63■■□□□ 1.85
PCDHA11-203ENST00000617408 SMC1BQ8NDV3 1235 aa26.62■■□□□ 1.85
PCDHA11-203ENST00000617408 PLA2G12BQ9BX93 195 aa26.62■■□□□ 1.85
PCDHA11-203ENST00000617408 SRCIN1Q9C0H9 1055 aa26.62■■□□□ 1.85
PCDHA11-203ENST00000617408 SMC4Q9NTJ3 1288 aa26.62■■□□□ 1.85
PCDHA11-203ENST00000617408 PTPRCP08575 1304 aa26.62■■□□□ 1.85
PCDHA11-203ENST00000617408 RTL9Q8NET4 1388 aa26.61■■□□□ 1.85
PCDHA11-203ENST00000617408 C6orf229H3BNL8 230 aa26.61■■□□□ 1.85
PCDHA11-203ENST00000617408 HNRNPUQ00839 825 aaKnown RBP eCLIP26.61■■□□□ 1.85
PCDHA11-203ENST00000617408 ALDH1L2Q3SY69 923 aa26.61■■□□□ 1.85
PCDHA11-203ENST00000617408 ANKIB1Q9P2G1 1089 aa26.61■■□□□ 1.85
PCDHA11-203ENST00000617408 FSTL1Q12841 308 aa26.6■■□□□ 1.85
PCDHA11-203ENST00000617408 FAM161AQ3B820 660 aa26.6■■□□□ 1.85
PCDHA11-203ENST00000617408 ALDH1L1O75891 902 aa26.59■■□□□ 1.85
PCDHA11-203ENST00000617408 WASHC4Q2M389 1173 aa26.59■■□□□ 1.85
PCDHA11-203ENST00000617408 POLLQ9UGP5 575 aa26.59■■□□□ 1.85
PCDHA11-203ENST00000617408 HACL1Q9UJ83 578 aa26.59■■□□□ 1.85
PCDHA11-203ENST00000617408 ZNRF3Q9ULT6 936 aa26.59■■□□□ 1.85
PCDHA11-203ENST00000617408 GRM8O00222 908 aa26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 RIMBP2O15034 1052 aa26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 UFL1O94874 794 aa26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 CT47B1P0C2W7 299 aaPredicted RBP26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 GPR101Q96P66 508 aaPredicted RBP26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 EYA3Q99504 573 aa26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 C9orf78Q9NZ63 289 aaPredicted RBP26.58■■□□□ 1.85
PCDHA11-203ENST00000617408 ITGA6P23229 1130 aa26.57■■□□□ 1.84
PCDHA11-203ENST00000617408 TBC1D16Q8TBP0 767 aa26.57■■□□□ 1.84
PCDHA11-203ENST00000617408 GGA1Q9UJY5 639 aa26.57■■□□□ 1.84
PCDHA11-203ENST00000617408 IGHMBP2P38935 993 aaKnown RBP26.56■■□□□ 1.84
PCDHA11-203ENST00000617408 TAF1DQ9H5J8 278 aaPredicted RBP26.56■■□□□ 1.84
PCDHA11-203ENST00000617408 PODXL2Q9NZ53 605 aa26.56■■□□□ 1.84
PCDHA11-203ENST00000617408 CHMP3Q9Y3E7 222 aa26.56■■□□□ 1.84
PCDHA11-203ENST00000617408 POTEIP0CG38 1075 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms