RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 FSD2A1L4K1 749 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 CCDC96Q2M329 555 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 C16orf71Q8IYS4 520 aaPredicted RBP12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 TACC1O75410 805 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 U2AF2P26368 475 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 SLC26A6Q9BXS9 759 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 USP26Q9BXU7 913 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 NSRP1Q9H0G5 558 aaKnown RBP12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 STRN4Q9NRL3 753 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 PHACTR2O75167 634 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 HAND2P61296 217 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 FBF1Q8TES7 1133 aa12.19□□□□□ -0.46
CLTCL1-209ENST00000617103 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 PI4KAP2A4QPH2 592 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 AK2P54819 239 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 C6orf163Q5TEZ5 329 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 RRAGBQ5VZM2 374 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 PI4KAP1Q8N8J0 262 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 IFNKQ9P0W0 207 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 CAMSAP2Q08AD1 1489 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 SPTLC2O15270 562 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 KRT86O43790 486 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 KRT83P78385 493 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 KIAA0753Q2KHM9 967 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 HDXQ7Z353 690 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 MACROD2A1Z1Q3 448 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
CLTCL1-209ENST00000617103 FAM83GA6ND36 823 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 CETN1Q12798 172 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 MSL1Q68DK7 614 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 CEP57Q86XR8 500 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 CCDC144CPQ8IYA2 1237 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 ANKRD24Q8TF21 1146 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 PROSER2Q86WR7 435 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 TNNQ9UQP3 1299 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 MAP3K2Q9Y2U5 619 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 STAMBPO95630 424 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 STARD3NLO95772 234 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 EVCP57679 992 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 TCERG1LQ5VWI1 586 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 PLEKHM2Q8IWE5 1019 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 RAB11FIP4Q86YS3 637 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 ANKS4BQ8N8V4 417 aa12.17□□□□□ -0.46
CLTCL1-209ENST00000617103 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 Q6ZUG5 572 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 PUF60Q9UHX1 559 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 AFMP43652 599 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 KIF5BP33176 963 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 KARSQ15046 597 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 MARCKSP29966 332 aaPredicted RBP12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 PPP2R3AQ06190 1150 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 ZNF569Q5MCW4 686 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 SELENOOQ9BVL4 669 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 LRRC27Q9C0I9 530 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 LZTFL1Q9NQ48 299 aa12.16□□□□□ -0.46
CLTCL1-209ENST00000617103 RHOXF2BP0C7M4 288 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 DRC1Q96MC2 740 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 RHOXF2Q9BQY4 288 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 ZBTB43O43298 467 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 SLC5A1P13866 664 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 CCDC6Q16204 474 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 MFSD6Q6ZSS7 791 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 PSMA7O14818 248 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 SPAG5Q96R06 1193 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
CLTCL1-209ENST00000617103 ZEB2O60315 1214 aa12.15□□□□□ -0.47
CLTCL1-209ENST00000617103 VAV2P52735 878 aa12.15□□□□□ -0.47
CLTCL1-209ENST00000617103 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.47
CLTCL1-209ENST00000617103 ZSCAN29Q8IWY8 852 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms