RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 CFAP45Q9UL16 551 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 UTYO14607 1347 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 SOX12O15370 315 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 SLFN14P0C7P3 912 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 USPL1Q5W0Q7 1092 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 LAMA4Q16363 1823 aa18.34■□□□□ 0.53
GPN1-212ENST00000616939 ATL3Q6DD88 541 aa18.33■□□□□ 0.53
GPN1-212ENST00000616939 ZNF771Q7L3S4 317 aaPredicted RBP18.33■□□□□ 0.53
GPN1-212ENST00000616939 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.53
GPN1-212ENST00000616939 DHX8Q14562 1220 aaKnown RBP18.33■□□□□ 0.52
GPN1-212ENST00000616939 AACSQ86V21 672 aa18.33■□□□□ 0.52
GPN1-212ENST00000616939 FAM227BQ96M60 508 aa18.33■□□□□ 0.52
GPN1-212ENST00000616939 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.52
GPN1-212ENST00000616939 LMTK3Q96Q04 1460 aa18.32■□□□□ 0.52
GPN1-212ENST00000616939 PTPN14Q15678 1187 aa18.32■□□□□ 0.52
GPN1-212ENST00000616939 LLPHQ9BRT6 129 aaKnown RBP18.32■□□□□ 0.52
GPN1-212ENST00000616939 TFIP11Q9UBB9 837 aaKnown RBP18.32■□□□□ 0.52
GPN1-212ENST00000616939 TUBB4AP04350 444 aa18.31■□□□□ 0.52
GPN1-212ENST00000616939 KCNJ6P48051 423 aa18.31■□□□□ 0.52
GPN1-212ENST00000616939 GSDMDP57764 484 aa18.31■□□□□ 0.52
GPN1-212ENST00000616939 CCZ1BP86790 482 aa18.31■□□□□ 0.52
GPN1-212ENST00000616939 CCZ1P86791 482 aaPredicted RBP18.31■□□□□ 0.52
GPN1-212ENST00000616939 ABCC6O95255 1503 aa18.31■□□□□ 0.52
GPN1-212ENST00000616939 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 NAA16Q6N069 864 aaPredicted RBP18.3■□□□□ 0.52
GPN1-212ENST00000616939 SMARCC2Q8TAQ2 1214 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 RCOR1Q9UKL0 485 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 TERF2Q15554 542 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 BRF1Q92994 677 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 ANO10Q9NW15 660 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 IMPACTQ9P2X3 320 aa18.3■□□□□ 0.52
GPN1-212ENST00000616939 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
GPN1-212ENST00000616939 EIF2S2P20042 333 aaKnown RBP18.29■□□□□ 0.52
GPN1-212ENST00000616939 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
GPN1-212ENST00000616939 C11orf57Q6ZUT1 292 aaPredicted RBP18.29■□□□□ 0.52
GPN1-212ENST00000616939 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
GPN1-212ENST00000616939 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
GPN1-212ENST00000616939 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
GPN1-212ENST00000616939 CCDC66A2RUB6 948 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 SASH1O94885 1247 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 SLU7O95391 586 aaKnown RBP18.28■□□□□ 0.52
GPN1-212ENST00000616939 KMT5BQ4FZB7 885 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
GPN1-212ENST00000616939 FSD1Q9BTV5 496 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
GPN1-212ENST00000616939 ZNF215Q9UL58 517 aaPredicted RBP18.28■□□□□ 0.52
GPN1-212ENST00000616939 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 ERBB3P21860 1342 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 TAF5LO75529 589 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 SKILP12757 684 aa18.28■□□□□ 0.52
GPN1-212ENST00000616939 G3BP1Q13283 466 aaKnown RBP eCLIP18.28■□□□□ 0.525e-6■■■■□ 21.6
GPN1-212ENST00000616939 EAF2Q96CJ1 260 aaPredicted RBP18.28■□□□□ 0.52
GPN1-212ENST00000616939 NFAT5O94916 1531 aa18.27■□□□□ 0.52
GPN1-212ENST00000616939 ADD1P35611 737 aaKnown RBP18.27■□□□□ 0.52
GPN1-212ENST00000616939 NAA30Q147X3 362 aaPredicted RBP18.27■□□□□ 0.52
GPN1-212ENST00000616939 L2HGDHQ9H9P8 463 aa18.27■□□□□ 0.52
GPN1-212ENST00000616939 PA2G4Q9UQ80 394 aaKnown RBP18.27■□□□□ 0.52
GPN1-212ENST00000616939 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 DTNBO60941 627 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 NLRP6P59044 892 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 NUTM2GQ5VZR2 741 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 CCDC73Q6ZRK6 1079 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 DHX40Q8IX18 779 aaKnown RBP18.26■□□□□ 0.51
GPN1-212ENST00000616939 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
GPN1-212ENST00000616939 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 USP27XA6NNY8 438 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 H3BQV1 296 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
GPN1-212ENST00000616939 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 CEP57L1Q8IYX8 460 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 ENGASEQ8NFI3 743 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 LINS1Q8NG48 757 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 ZNF396Q96N95 335 aaPredicted RBP18.26■□□□□ 0.51
GPN1-212ENST00000616939 BPIFA3Q9BQP9 254 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
GPN1-212ENST00000616939 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
GPN1-212ENST00000616939 BECN2A8MW95 431 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 JAK2O60674 1132 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 PFKFB2O60825 505 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 FAM160A1Q05DH4 1040 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 CCAR1Q8IX12 1150 aaKnown RBP18.25■□□□□ 0.51
GPN1-212ENST00000616939 CCDC150Q8NCX0 1101 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 NAT10Q9H0A0 1025 aaKnown RBP18.25■□□□□ 0.51
GPN1-212ENST00000616939 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
GPN1-212ENST00000616939 FBXO38Q6PIJ6 1188 aa18.24■□□□□ 0.51
GPN1-212ENST00000616939 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
GPN1-212ENST00000616939 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
GPN1-212ENST00000616939 TAF6LQ9Y6J9 622 aa18.24■□□□□ 0.51
GPN1-212ENST00000616939 GRM8O00222 908 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 KINO60870 393 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms