RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.07□□□□□ -0.48
TPT1-214ENST00000616577 CCDC171Q6TFL3 1326 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 NPHP3Q7Z494 1330 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
TPT1-214ENST00000616577 MAP9Q49MG5 647 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 HS1BP3Q53T59 392 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 CREB3L3Q68CJ9 461 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 DZIP1Q86YF9 867 aaKnown RBP12.07□□□□□ -0.48
TPT1-214ENST00000616577 ALG1Q9BT22 464 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
TPT1-214ENST00000616577 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
TPT1-214ENST00000616577 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 IDEP14735 1019 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 MFSD6Q6ZSS7 791 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 UBE2Q2Q8WVN8 375 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 MTIF2P46199 727 aaKnown RBP12.06□□□□□ -0.48
TPT1-214ENST00000616577 LUZP1Q86V48 1076 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 N4BP3O15049 544 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 PUS7Q96PZ0 661 aaKnown RBP12.06□□□□□ -0.48
TPT1-214ENST00000616577 PLCD4Q9BRC7 762 aa12.06□□□□□ -0.48
TPT1-214ENST00000616577 MSH6P52701 1360 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 PAFAH1B1P43034 410 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 EYA1Q99502 592 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 UBA5Q9GZZ9 404 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
TPT1-214ENST00000616577 ZBTB43O43298 467 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 AFMP43652 599 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
TPT1-214ENST00000616577 ZNF444Q8N0Y2 327 aaPredicted RBP12.05□□□□□ -0.48
TPT1-214ENST00000616577 GOLGA6L9A6NEM1 432 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 UBA7P41226 1012 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
TPT1-214ENST00000616577 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 TTC41PQ6P2S7 1318 aa12.05□□□□□ -0.48
TPT1-214ENST00000616577 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
TPT1-214ENST00000616577 SLC4A8Q2Y0W8 1093 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 FAM173BQ6P4H8 233 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 TTC21AQ8NDW8 1320 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 LMAN1P49257 510 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 KRT222Q8N1A0 295 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 UHRF1BP1Q6BDS2 1440 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 LIG1P18858 919 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 SMARCC1Q92922 1105 aaPredicted RBP12.04□□□□□ -0.48
TPT1-214ENST00000616577 A2MP01023 1474 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 IGSF3O75054 1194 aa12.04□□□□□ -0.48
TPT1-214ENST00000616577 SEPT7Q16181 437 aaKnown RBP12.04□□□□□ -0.48
TPT1-214ENST00000616577 ZMYM4Q5VZL5 1548 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 SPTLC2O15270 562 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 USP8P40818 1118 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 TSG101Q99816 390 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 IQSEC3Q9UPP2 1182 aaPredicted RBP12.03□□□□□ -0.48
TPT1-214ENST00000616577 GOLGA6L7A0A1B0GV03 622 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 PRC1O43663 620 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 MATR3P43243 847 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPT1-214ENST00000616577 WTAPQ15007 396 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 KANK3Q6NY19 840 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 VAT1LQ9HCJ6 419 aa12.03□□□□□ -0.48
TPT1-214ENST00000616577 NPC1L1Q9UHC9 1359 aa12.02□□□□□ -0.48
TPT1-214ENST00000616577 PTPDC1A2A3K4 754 aa12.02□□□□□ -0.48
TPT1-214ENST00000616577 ZFYP08048 801 aaPredicted RBP12.02□□□□□ -0.48
TPT1-214ENST00000616577 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.48
TPT1-214ENST00000616577 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.48
TPT1-214ENST00000616577 NPATQ14207 1427 aa12.02□□□□□ -0.48
TPT1-214ENST00000616577 ANKRD62A6NC57 917 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
TPT1-214ENST00000616577 RAB34Q9BZG1 259 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 CCDC113Q9H0I3 377 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 SSR1P43307 286 aaKnown RBP12.02□□□□□ -0.49
TPT1-214ENST00000616577 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 SLC9C2Q5TAH2 1124 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.49
TPT1-214ENST00000616577 PAG1Q9NWQ8 432 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 FLT4P35916 1363 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 SLU7O95391 586 aaKnown RBP12.02□□□□□ -0.49
TPT1-214ENST00000616577 MCM3P25205 808 aa12.02□□□□□ -0.49
TPT1-214ENST00000616577 IL15P40933 162 aaPredicted RBP12.02□□□□□ -0.49
TPT1-214ENST00000616577 MAP3K19Q56UN5 1328 aa12.01□□□□□ -0.49
TPT1-214ENST00000616577 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
TPT1-214ENST00000616577 PPP1R12BO60237 982 aaPredicted RBP12.01□□□□□ -0.49
TPT1-214ENST00000616577 HLTFQ14527 1009 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPT1-214ENST00000616577 CCDC96Q2M329 555 aa12.01□□□□□ -0.49
TPT1-214ENST00000616577 TMEM266Q2M3C6 531 aa12.01□□□□□ -0.49
TPT1-214ENST00000616577 JADE2Q9NQC1 790 aa12.01□□□□□ -0.49
TPT1-214ENST00000616577 CFAP43Q8NDM7 1665 aa12.01□□□□□ -0.49
TPT1-214ENST00000616577 MCM6Q14566 821 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms