RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 HOXC9P31274 260 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 AXDND1Q5T1B0 1012 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 MCM3P25205 808 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 ATP2B3Q16720 1220 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 CARD14Q9BXL6 1004 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 DCTPP1Q9H773 170 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 CEP85Q6P2H3 762 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 NYXQ9GZU5 481 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 ATP7BP35670 1465 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 UNC13BO14795 1591 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 ZSCAN22P10073 491 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 AMPD3Q01432 767 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 USP16Q9Y5T5 823 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 PER1O15534 1290 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 MCMDC2Q4G0Z9 681 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 KAT14Q9H8E8 782 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 RBM27Q9P2N5 1060 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 TMEM2Q9UHN6 1383 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 TOP1P11387 765 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 CHRNA2Q15822 529 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 CDCA7Q9BWT1 371 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 GBP3Q9H0R5 595 aa10.54□□□□□ -0.72
SPTBN1-207ENST00000615901 GOLGA6L9A6NEM1 432 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 VAMP4O75379 141 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 KCNG4Q8TDN1 519 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 PIBF1Q8WXW3 757 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 KIF5CO60282 957 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 FILIP1Q7Z7B0 1213 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 SMC5Q8IY18 1101 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 CNNM3Q8NE01 707 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 ESR2Q92731 530 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 PAG1Q9NWQ8 432 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 KDM6BO15054 1643 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 RMND1Q9NWS8 449 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 MICU3Q86XE3 530 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 CALML4Q96GE6 196 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 ORC3Q9UBD5 711 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 NLRP5P59047 1200 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 TSHZ3Q63HK5 1081 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 TCP11L1Q9NUJ3 509 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 SEPT11Q9NVA2 429 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 RFC4P35249 363 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 ATP6V1AP38606 617 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 COPS6Q7L5N1 327 aa10.53□□□□□ -0.72
SPTBN1-207ENST00000615901 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.72
SPTBN1-207ENST00000615901 YEATS4O95619 227 aa10.52□□□□□ -0.72
SPTBN1-207ENST00000615901 WTAPQ15007 396 aa10.52□□□□□ -0.72
SPTBN1-207ENST00000615901 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.72
SPTBN1-207ENST00000615901 TMX3Q96JJ7 454 aa10.52□□□□□ -0.72
SPTBN1-207ENST00000615901 GTPBP4Q9BZE4 634 aaKnown RBP10.52□□□□□ -0.72
SPTBN1-207ENST00000615901 CCT2P78371 535 aaKnown RBP10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 KIF18AQ8NI77 898 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 RTL1A6NKG5 1358 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 ERMNQ8TAM6 284 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 FAM135BQ49AJ0 1406 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 TRAF1Q13077 416 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 MAP9Q49MG5 647 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 SPATA31E1Q6ZUB1 1445 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 PLCG2P16885 1265 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 PTPN14Q15678 1187 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 C8orf34Q49A92 452 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 MAP3K19Q56UN5 1328 aa10.52□□□□□ -0.73
SPTBN1-207ENST00000615901 STXBP4Q6ZWJ1 553 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 MLH3Q9UHC1 1453 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■■■■□ 21.3
SPTBN1-207ENST00000615901 RNF113AO15541 343 aaKnown RBP10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 RBM25P49756 843 aaKnown RBP10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 ZRSR2Q15696 482 aaKnown RBP10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 IL13P35225 146 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 GNAQP50148 359 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 EHBP1Q8NDI1 1231 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 CCDC191Q8NCU4 936 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 TOM1O60784 492 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 CALM1P0DP23 149 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 CALM2P0DP24 149 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 CALM3P0DP25 149 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 CETN2P41208 172 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 ALS2CR12Q96Q35 445 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 EYA1Q99502 592 aa10.51□□□□□ -0.73
SPTBN1-207ENST00000615901 H0YHG0 523 aa10.5□□□□□ -0.73
SPTBN1-207ENST00000615901 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
SPTBN1-207ENST00000615901 RBM8AQ9Y5S9 174 aaKnown RBP10.5□□□□□ -0.73
SPTBN1-207ENST00000615901 ZBTB43O43298 467 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms