RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 PLA2G12BQ9BX93 195 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
MMP28-205ENST00000615317 SPON1Q9HCB6 807 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 RABL6Q3YEC7 729 aaPredicted RBP11.39□□□□□ -0.59
MMP28-205ENST00000615317 LMBR1LQ6UX01 489 aa11.39□□□□□ -0.59
MMP28-205ENST00000615317 GREM2Q9H772 168 aa11.39□□□□□ -0.59
MMP28-205ENST00000615317 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
MMP28-205ENST00000615317 PNMA6EA0A0J9YXQ4 647 aa11.38□□□□□ -0.59
MMP28-205ENST00000615317 HSP90B1P14625 803 aaKnown RBP11.38□□□□□ -0.59
MMP28-205ENST00000615317 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
MMP28-205ENST00000615317 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 CHRNA5P30532 468 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 TTLL11Q8NHH1 800 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
MMP28-205ENST00000615317 NLRP3Q96P20 1036 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 BRIP1Q9BX63 1249 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 MYH13Q9UKX3 1938 aa11.37□□□□□ -0.59
MMP28-205ENST00000615317 ITGA6P23229 1130 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 PDE6BP35913 854 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 MTX1Q13505 466 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 CRY2Q49AN0 593 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 SLC51AQ86UW1 340 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 C2CD5Q86YS7 1000 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 KLHDC4Q8TBB5 520 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
MMP28-205ENST00000615317 SF3B3Q15393 1217 aaKnown RBP11.35□□□□□ -0.59
MMP28-205ENST00000615317 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
MMP28-205ENST00000615317 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
MMP28-205ENST00000615317 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
MMP28-205ENST00000615317 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
MMP28-205ENST00000615317 ANKRD18BA2A2Z9 1011 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 CSF1RP07333 972 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 SRGNP10124 158 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
MMP28-205ENST00000615317 IFIT5Q13325 482 aaKnown RBP11.34□□□□□ -0.59
MMP28-205ENST00000615317 AAMPQ13685 434 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 POLA2Q14181 598 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 CCDC57Q2TAC2 916 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 CELF1Q92879 486 aaKnown RBP11.34□□□□□ -0.59
MMP28-205ENST00000615317 FHDC1Q9C0D6 1143 aaPredicted RBP11.34□□□□□ -0.59
MMP28-205ENST00000615317 SIL1Q9H173 461 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
MMP28-205ENST00000615317 TIAM2Q8IVF5 1701 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 HMMRO75330 724 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 NPR1P16066 1061 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 DPEP1P16444 411 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 ATP8B2P98198 1209 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 GRAPQ13588 217 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
MMP28-205ENST00000615317 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
MMP28-205ENST00000615317 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
MMP28-205ENST00000615317 SSH3Q8TE77 659 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
MMP28-205ENST00000615317 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
MMP28-205ENST00000615317 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
MMP28-205ENST00000615317 EXOC6BQ9Y2D4 811 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 ZNF609O15014 1411 aa11.33□□□□□ -0.6
MMP28-205ENST00000615317 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
MMP28-205ENST00000615317 H0YIN7 160 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 APBB1O00213 710 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
MMP28-205ENST00000615317 IGHMBP2P38935 993 aaKnown RBP11.32□□□□□ -0.6
MMP28-205ENST00000615317 B4GALNT3Q6L9W6 998 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 MASTLQ96GX5 879 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 CD2APQ9Y5K6 639 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 GTF3C3Q9Y5Q9 886 aa11.32□□□□□ -0.6
MMP28-205ENST00000615317 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
MMP28-205ENST00000615317 PTPN12Q05209 780 aaKnown RBP11.31□□□□□ -0.6
MMP28-205ENST00000615317 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
MMP28-205ENST00000615317 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
MMP28-205ENST00000615317 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
MMP28-205ENST00000615317 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
MMP28-205ENST00000615317 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
MMP28-205ENST00000615317 CCDC88AQ3V6T2 1871 aa11.31□□□□□ -0.6
MMP28-205ENST00000615317 SURF6O75683 361 aaKnown RBP11.3□□□□□ -0.6
MMP28-205ENST00000615317 IGHDP01880 384 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
MMP28-205ENST00000615317 HDAC1Q13547 482 aaPredicted RBP11.3□□□□□ -0.6
MMP28-205ENST00000615317 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 ERICH6BQ5W0A0 696 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 MPHOSPH8Q99549 860 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 COPRSQ9NQ92 184 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 CNNM1Q9NRU3 951 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
MMP28-205ENST00000615317 SNED1Q8TER0 1413 aa11.29□□□□□ -0.6
MMP28-205ENST00000615317 EYA2O00167 538 aa11.29□□□□□ -0.6
MMP28-205ENST00000615317 TGFB2P61812 414 aa11.29□□□□□ -0.6
MMP28-205ENST00000615317 OLFM4Q6UX06 510 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms